RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 BPIFB1Q8TDL5 484 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 IRGQQ8WZA9 623 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 IRF7Q92985 503 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 CYP2S1Q96SQ9 504 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 ULBP1Q9BZM6 244 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 MIS12Q9H081 205 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 BRD9Q9H8M2 597 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 ACP6Q9NPH0 428 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 CLIC5Q9NZA1 410 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 FBXL21Q9UKT6 434 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 A0A1W2PQH9 124 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZNF263O14978 683 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 CHADO15335 359 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 LSM8O95777 96 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 YWHAGP61981 247 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 SIGLEC14Q08ET2 396 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 FIGNQ5HY92 759 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 BTBD8Q5XKL5 378 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 POTEHQ6S545 545 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 VITQ6UXI7 678 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 RSRC2Q7L4I2 434 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 TMEM35BQ8NCS4 154 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 IPO4Q8TEX9 1081 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 USP13Q92995 863 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 TRIM62Q9BVG3 475 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 NUCKS1Q9H1E3 243 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 SYNCQ9H7C4 482 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC2A4RGQ9NR83 387 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 ABCC13Q9NSE7 274 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 OLA1Q9NTK5 396 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 ARHGAP26Q9UNA1 814 aa13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC1-206ENST00000573989 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 COCHO43405 550 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 PRAMEF12O95522 483 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 OLFM2O95897 454 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 RARGP13631 454 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 TCF3P15923 654 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 GDI1P31150 447 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 RPL34P49207 117 aaKnown RBP13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 DAOAP59103 153 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 CDR2Q01850 454 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 ARID5AQ03989 594 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 PDCLQ13371 301 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 GRM2Q14416 872 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 C10orf120Q5SQS8 335 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 TAF3Q5VWG9 929 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 TRIM72Q6ZMU5 477 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 PASD1Q8IV76 773 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 CSGALNACT1Q8TDX6 532 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 EPS8L1Q8TE68 723 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 RNF139Q8WU17 664 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 DNASE1L2Q92874 299 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 PPP1R13BQ96KQ4 1090 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 PLA2G2FQ9BZM2 168 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 XPO4Q9C0E2 1151 aaKnown RBP13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 SMG9Q9H0W8 520 aaKnown RBP13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 CCSER2Q9H7U1 834 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 WNT16Q9UBV4 365 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 DNMT3LQ9UJW3 386 aa13.4□□□□□ -0.26
TRAPPC1-206ENST00000573989 A0A1W2PQJ5 194 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 SLC9A3R1O14745 358 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 NARSO43776 548 aaKnown RBP13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 TPM1P09493 284 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 GPC5P78333 572 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 TRIM14Q14142 442 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 MTF1Q14872 753 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 TRIM67Q6ZTA4 783 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 C1orf131Q8NDD1 294 aaKnown RBP13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 TTC16Q8NEE8 873 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 SHDQ96IW2 340 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 SLC22A12Q96S37 553 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 RNF38Q9H0F5 515 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 NMUR1Q9HB89 426 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 TRPV5Q9NQA5 729 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 STRIP2Q9ULQ0 834 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 SH3BP1Q9Y3L3 701 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 CPQQ9Y646 472 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 ITIH6Q6UXX5 1313 aa13.39□□□□□ -0.27
TRAPPC1-206ENST00000573989 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 E5RJQ4 531 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 LEFTY2O00292 366 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 PIK3R2O00459 728 aa13.38□□□□□ -0.27
TRAPPC1-206ENST00000573989 LTFP02788 710 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms