RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 SLC35F5Q8WV83 523 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 RSAD2Q8WXG1 361 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 SECISBP2LQ93073 1101 aaKnown RBP11.61□□□□□ -0.55
CHD3-216ENST00000573936 ZSWIM1Q9BR11 485 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 NUP58Q9BVL2 599 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 RBSNQ9H1K0 784 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 NLRC4Q9NPP4 1024 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CYLDQ9NQC7 956 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 TDP1Q9NUW8 608 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CHORDC1Q9UHD1 332 aaPredicted RBP11.61□□□□□ -0.55
CHD3-216ENST00000573936 FBXL21Q9UKT6 434 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 DUSP12Q9UNI6 340 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 DCHS1Q96JQ0 3298 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 C2orf78A6NCI8 922 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 HEPACAM2A8MVW5 462 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 FBXO21O94952 628 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 ZBED1O96006 694 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 CKMP06732 381 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 RALAP11233 206 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 SRFP11831 508 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 TCF3P15923 654 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 PSMC3P17980 439 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 FCARP24071 287 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 SOX5P35711 763 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 GPD2P43304 727 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 TKTL1P51854 596 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 JAM2P57087 298 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 PFKPQ01813 784 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 PM20D1Q6GTS8 502 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 POTEHQ6S545 545 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 GPRIN1Q7Z2K8 1008 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 SLC47A2Q86VL8 602 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 DDX42Q86XP3 938 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHD3-216ENST00000573936 ZNF677Q86XU0 584 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 ZNF276Q8N554 614 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 ARL14EPQ8N8R7 260 aaPredicted RBP11.6□□□□□ -0.55
CHD3-216ENST00000573936 RNF214Q8ND24 703 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 CDK5RAP1Q96SZ6 601 aaKnown RBP11.6□□□□□ -0.55
CHD3-216ENST00000573936 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 TRMT61BQ9BVS5 477 aaKnown RBP11.6□□□□□ -0.55
CHD3-216ENST00000573936 EDEM3Q9BZQ6 932 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 LHX5Q9H2C1 402 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 PDCL3Q9H2J4 239 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 CNGB3Q9NQW8 809 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 THG1LQ9NWX6 298 aaKnown RBP11.6□□□□□ -0.55
CHD3-216ENST00000573936 GMIPQ9P107 970 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 MYO6Q9UM54 1294 aa11.6□□□□□ -0.55
CHD3-216ENST00000573936 TULP2O00295 520 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 EPHB6O15197 1021 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 OAS1P00973 400 aaKnown RBP11.59□□□□□ -0.55
CHD3-216ENST00000573936 CALCAP01258 141 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 CYP11B1P15538 503 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 VIPR2P41587 438 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 SLC7A9P82251 487 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 CWF19L1Q69YN2 538 aaKnown RBP11.59□□□□□ -0.55
CHD3-216ENST00000573936 PMF1Q6P1K2 205 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 DENND1BQ6P3S1 775 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 VITQ6UXI7 678 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 KIAA1958Q8N8K9 716 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 BPIFB1Q8TDL5 484 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 IRGQQ8WZA9 623 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 PLA2G2FQ9BZM2 168 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 ULBP1Q9BZM6 244 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 NACA2Q9H009 215 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 ACP6Q9NPH0 428 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 SLC2A4RGQ9NR83 387 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 CLIC5Q9NZA1 410 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 ARHGAP26Q9UNA1 814 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 DOCK8Q8NF50 2099 aa11.59□□□□□ -0.55
CHD3-216ENST00000573936 A0A1W2PQH9 124 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 ZNF263O14978 683 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 CHADO15335 359 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 SART1O43290 800 aaKnown RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 TLR5O60602 858 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 GFPT2O94808 682 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 OLFM2O95897 454 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 PNMA6AP0CW24 399 aaPredicted RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 RARGP13631 454 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 LCP1P13796 627 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
CHD3-216ENST00000573936 RGS7P49802 495 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 YWHAGP61981 247 aaKnown RBP eCLIP11.58□□□□□ -0.56
CHD3-216ENST00000573936 ADIGQ0VDE8 80 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 ANGPT1Q15389 498 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 ARHGAP29Q52LW3 1261 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 FIGNQ5HY92 759 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 KLHDC10Q6PID8 442 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 TMEM35BQ8NCS4 154 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 MSANTD4Q8NCY6 345 aa11.58□□□□□ -0.56
CHD3-216ENST00000573936 ZNF397Q8NF99 534 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms