RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 K7EQS6 105 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 CYP26A1O43174 497 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 STX10O60499 249 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 TBX18O95935 607 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 KIF11P52732 1056 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 FBXO43Q4G163 708 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 ISM2Q6H9L7 571 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 SCD5Q86SK9 330 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 WDR5BQ86VZ2 330 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 C12orf40Q86WS4 652 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 SFTPA1Q8IWL2 248 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 PHTF2Q8N3S3 785 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 DHTKD1Q96HY7 919 aaPredicted RBP18.41■□□□□ 0.54
SMG6-214ENST00000573827 TSG101Q99816 390 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 DUSP16Q9BY84 665 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 FBXO44Q9H4M3 255 aa18.41■□□□□ 0.54
SMG6-214ENST00000573827 FAM124BQ9H5Z6 455 aaPredicted RBP18.41■□□□□ 0.54
SMG6-214ENST00000573827 PMM2O15305 246 aa18.4■□□□□ 0.54
SMG6-214ENST00000573827 TLR5O60602 858 aa18.4■□□□□ 0.54
SMG6-214ENST00000573827 ARHGAP17Q68EM7 881 aa18.4■□□□□ 0.54
SMG6-214ENST00000573827 HEATR6Q6AI08 1181 aaKnown RBP18.4■□□□□ 0.54
SMG6-214ENST00000573827 DDX42Q86XP3 938 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMG6-214ENST00000573827 KIAA2013Q8IYS2 634 aa18.4■□□□□ 0.54
SMG6-214ENST00000573827 KLF16Q9BXK1 252 aaPredicted RBP18.4■□□□□ 0.54
SMG6-214ENST00000573827 PARD6AQ9NPB6 346 aa18.4■□□□□ 0.54
SMG6-214ENST00000573827 ARMCX3Q9UH62 379 aaPredicted RBP18.4■□□□□ 0.54
SMG6-214ENST00000573827 MYO18AQ92614 2054 aaKnown RBP18.4■□□□□ 0.54
SMG6-214ENST00000573827 EML5Q05BV3 1969 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 A0A0A0MRY4 1105 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 CCDC163A0A0D9SF12 145 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 SLC9A3R1O14745 358 aaPredicted RBP18.39■□□□□ 0.53
SMG6-214ENST00000573827 PSMA7O14818 248 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 CNR2P34972 360 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 SLC6A11P48066 632 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 NR1H3Q13133 447 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 ZNF394Q53GI3 561 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 DCAF17Q5H9S7 520 aaPredicted RBP18.39■□□□□ 0.53
SMG6-214ENST00000573827 SYT13Q7L8C5 426 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 ETFBKMTQ8IXQ9 262 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 TTC39CQ8N584 583 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 CCDC150Q8NCX0 1101 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 LMO3Q8TAP4 145 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 USP33Q8TEY7 942 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 TMEM176AQ96HP8 235 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 CEP63Q96MT8 703 aa18.39■□□□□ 0.53
SMG6-214ENST00000573827 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMG6-214ENST00000573827 HOOK1Q9UJC3 728 aaKnown RBP18.39■□□□□ 0.53
SMG6-214ENST00000573827 ATG13O75143 517 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 ACO1P21399 889 aaKnown RBP18.38■□□□□ 0.53
SMG6-214ENST00000573827 EIF2DP41214 584 aaKnown RBP18.38■□□□□ 0.53
SMG6-214ENST00000573827 PXNP49023 591 aaPredicted RBP18.38■□□□□ 0.53
SMG6-214ENST00000573827 CUL2Q13617 745 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 RAB41Q5JT25 222 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 LY6G5CQ5SRR4 150 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 KLHDC10Q6PID8 442 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 CCDC186Q7Z3E2 898 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 TTC30AQ86WT1 665 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 BBS7Q8IWZ6 715 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 ZNF276Q8N554 614 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 RPLP0P6Q8NHW5 317 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 RMDN1Q96DB5 314 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 OTUB2Q96DC9 234 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 P2RY11Q96G91 374 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 UBXN6Q9BZV1 441 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 TLR8Q9NR97 1041 aaKnown RBP18.38■□□□□ 0.53
SMG6-214ENST00000573827 TBC1D14Q9P2M4 693 aa18.38■□□□□ 0.53
SMG6-214ENST00000573827 A0A1W2PQH9 124 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 FMO5P49326 533 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 LPAL2Q16609 132 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 TCERG1LQ5VWI1 586 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 LAIR1Q6GTX8 287 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 HTR3DQ70Z44 454 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 BHLHA9Q7RTU4 235 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 HEXIM2Q96MH2 286 aaKnown RBP18.37■□□□□ 0.53
SMG6-214ENST00000573827 METTL14Q9HCE5 456 aaKnown RBP18.37■□□□□ 0.53
SMG6-214ENST00000573827 NCDNQ9UBB6 729 aa18.37■□□□□ 0.53
SMG6-214ENST00000573827 TULP2O00295 520 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 MDM4O15151 490 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 HOXC11O43248 304 aaPredicted RBP18.36■□□□□ 0.53
SMG6-214ENST00000573827 ADH5P11766 374 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 HNRNPLP14866 589 aaKnown RBP eCLIP18.36■□□□□ 0.533e-10■■■■□ 26.4
SMG6-214ENST00000573827 SIM2Q14190 667 aaPredicted RBP18.36■□□□□ 0.53
SMG6-214ENST00000573827 Q6ZNB5 142 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 PIGZQ86VD9 579 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 TMEM25Q86YD3 366 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 CAMKK1Q8N5S9 505 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 ANKRD52Q8NB46 1076 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 NELFBQ8WX92 580 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 EXOC4Q96A65 974 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 HHIPQ96QV1 700 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 MED15Q96RN5 788 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 ZSWIM1Q9BR11 485 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 DLL3Q9NYJ7 618 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 NUDT5Q9UKK9 219 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 HCN2Q9UL51 889 aa18.36■□□□□ 0.53
SMG6-214ENST00000573827 BIN1O00499 593 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 ADH1CP00326 375 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 RETP07949 1114 aa18.35■□□□□ 0.53
SMG6-214ENST00000573827 RARGP13631 454 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms