RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 CAPN11Q9UMQ6 739 aa18.14■□□□□ 0.49
LITAF-212ENST00000573332 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
LITAF-212ENST00000573332 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.14■□□□□ 0.49
LITAF-212ENST00000573332 LRRC53A6NM62 1247 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 HEPACAM2A8MVW5 462 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 DPYSL4O14531 572 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 SART1O43290 800 aaKnown RBP18.13■□□□□ 0.49
LITAF-212ENST00000573332 COCHO43405 550 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 TLR5O60602 858 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 CKMP06732 381 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 MMEP08473 750 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 LCP1P13796 627 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 CHRNB2P17787 502 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 PSMC3P17980 439 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 SNX16P57768 344 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 FCHO2Q0JRZ9 810 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 SPECC1LQ69YQ0 1117 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 VITQ6UXI7 678 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 TRIM72Q6ZMU5 477 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 UBALD2Q8IYN6 164 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 KIAA1958Q8N8K9 716 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 SYN2Q92777 582 aaPredicted RBP18.13■□□□□ 0.49
LITAF-212ENST00000573332 RSPRY1Q96DX4 576 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 CDK5RAP1Q96SZ6 601 aaKnown RBP18.13■□□□□ 0.49
LITAF-212ENST00000573332 KXD1Q9BQD3 176 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 PDCL3Q9H2J4 239 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 NAGPAQ9UK23 515 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 DUSP12Q9UNI6 340 aa18.13■□□□□ 0.49
LITAF-212ENST00000573332 AP5Z1O43299 807 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 DCXO43602 365 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 CYP1A1P04798 512 aaPredicted RBP18.12■□□□□ 0.49
LITAF-212ENST00000573332 RALAP11233 206 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 SRFP11831 508 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 RARGP13631 454 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 ALADP13716 330 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 ATP5C1P36542 298 aaKnown RBP18.12■□□□□ 0.49
LITAF-212ENST00000573332 PRKCIP41743 596 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 YWHAGP61981 247 aaKnown RBP eCLIP18.12■□□□□ 0.49
LITAF-212ENST00000573332 ZBED6P86452 979 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 FMO1Q01740 532 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 SFMBT2Q5VUG0 894 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 TAF3Q5VWG9 929 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 TADA2BQ86TJ2 420 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 PASD1Q8IV76 773 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 C1orf131Q8NDD1 294 aaKnown RBP18.12■□□□□ 0.49
LITAF-212ENST00000573332 ZNF397Q8NF99 534 aaPredicted RBP18.12■□□□□ 0.49
LITAF-212ENST00000573332 BPIFB1Q8TDL5 484 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 SLC20A1Q8WUM9 679 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 KHSRPQ92945 711 aaKnown RBP eCLIP18.12■□□□□ 0.49
LITAF-212ENST00000573332 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 LRRC3BQ96PB8 259 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 CPXM1Q96SM3 734 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 SYT11Q9BT88 431 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 CCSER2Q9H7U1 834 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 SLC2A4RGQ9NR83 387 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 CCL26Q9Y258 94 aa18.12■□□□□ 0.49
LITAF-212ENST00000573332 YJEFN3A6XGL0 299 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 E5RJQ4 531 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 E7ENQ6 273 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 PI4K2BG5E9Z4 385 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 PAPSS1O43252 624 aaPredicted RBP18.11■□□□□ 0.49
LITAF-212ENST00000573332 GYPCP04921 128 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 NOMO3P69849 1222 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 ZXDAP98168 799 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 ARID5AQ03989 594 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 TRIM14Q14142 442 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 BSPRYQ5W0U4 402 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 BEND5Q7L4P6 421 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 SCUBE3Q8IX30 993 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 ST13P5Q8NFI4 369 aaPredicted RBP18.11■□□□□ 0.49
LITAF-212ENST00000573332 TRMT61BQ9BVS5 477 aaKnown RBP18.11■□□□□ 0.49
LITAF-212ENST00000573332 SMG9Q9H0W8 520 aaKnown RBP18.11■□□□□ 0.49
LITAF-212ENST00000573332 TRPV5Q9NQA5 729 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 ABCC13Q9NSE7 274 aa18.11■□□□□ 0.49
LITAF-212ENST00000573332 LUC7L2Q9Y383 392 aaKnown RBP18.11■□□□□ 0.49
LITAF-212ENST00000573332 VCANP13611 3396 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 ZNF638Q14966 1978 aaKnown RBP18.1■□□□□ 0.49
LITAF-212ENST00000573332 DENND4CQ5VZ89 1909 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 OBSL1O75147 1896 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 CHADO15335 359 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 MBL2P11226 248 aaPredicted RBP18.1■□□□□ 0.49
LITAF-212ENST00000573332 GABRB2P47870 512 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 ZXDBP98169 803 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 PLCB2Q00722 1185 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 USP4Q13107 963 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 ZNF77Q15935 545 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 ASIC2Q16515 512 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 PTPN20Q4JDL3 420 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 BTBD8Q5XKL5 378 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 DDX42Q86XP3 938 aaKnown RBP eCLIP18.1■□□□□ 0.49
LITAF-212ENST00000573332 ZDHHC17Q8IUH5 632 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 GPIHBP1Q8IV16 184 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
LITAF-212ENST00000573332 EDAQ92838 391 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 ZFRQ96KR1 1074 aaKnown RBP18.1■□□□□ 0.49
LITAF-212ENST00000573332 AGPAT1Q99943 283 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 TRIM5Q9C035 493 aa18.1■□□□□ 0.49
LITAF-212ENST00000573332 MIS12Q9H081 205 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms