RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 TSTD1Q8NFU3 115 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 OR6B3Q8NGW1 331 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 C8orf48Q96LL4 319 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 CGRRF1Q99675 332 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 LSM14BQ9BX40 385 aaKnown RBP15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 TPSD1Q9BZJ3 242 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 SNX25Q9H3E2 840 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 METTL14Q9HCE5 456 aaKnown RBP15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 TMEM30AQ9NV96 361 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 INVSQ9Y283 1065 aa15.71■□□□□ 0.11
NPLOC4-207ENST00000572346 THADAQ6YHU6 1953 aa15.71■□□□□ 0.1
NPLOC4-207ENST00000572346 BCLAF3A2AJT9 711 aaKnown RBP15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 CAVIN2O95810 425 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 CYP17A1P05093 508 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 FAM163BP0C2L3 166 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 GBP1P32455 592 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 VAMP7P51809 220 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 CACNA2D1P54289 1103 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 TAF10Q12962 218 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 WDR72Q3MJ13 1102 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 TCERG1LQ5VWI1 586 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 RNF43Q68DV7 783 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 RASSF3Q86WH2 238 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 FAM114A1Q8IWE2 563 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 ZC3H3Q8IXZ2 948 aaKnown RBP15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 ADGRG2Q8IZP9 1017 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 KIAA1958Q8N8K9 716 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 TMC2Q8TDI7 906 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 DPEP3Q9H4B8 488 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 SMPD4Q9NXE4 827 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 ARMCX3Q9UH62 379 aaPredicted RBP15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 ANGPTL2Q9UKU9 493 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 MMP17Q9ULZ9 603 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 CPQQ9Y646 472 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 MYOFQ9NZM1 2061 aa15.7■□□□□ 0.1
NPLOC4-207ENST00000572346 SCAMP3O14828 347 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 PHACTR2O75167 634 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 CLSTN1O94985 981 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 KCNK5O95279 499 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 ABL1P00519 1130 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 OAS1P00973 400 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 PTPN1P18031 435 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 AP3M2P53677 418 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 TNNC1P63316 161 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 DHCR24Q15392 516 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 CRY1Q16526 586 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 USP39Q53GS9 565 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 DCAF17Q5H9S7 520 aaPredicted RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 TDRD10Q5VZ19 366 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 PMS2CLQ68D20 193 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 ANO7Q6IWH7 933 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 ENOX1Q8TC92 643 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 PARD3BQ8TEW8 1205 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 ZNF516Q92618 1163 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 CNOT6LQ96LI5 555 aaKnown RBP15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 SLITRK1Q96PX8 696 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 EDEM2Q9BV94 578 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 ZNF518BQ9C0D4 1074 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 ELOVL4Q9GZR5 314 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 MMRN2Q9H8L6 949 aa15.69■□□□□ 0.1
NPLOC4-207ENST00000572346 LRRIQ3A6PVS8 624 aaPredicted RBP15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 CLDN5O00501 218 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 SLC9A3R1O14745 358 aaPredicted RBP15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 STX10O60499 249 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 STAU1O95793 577 aaKnown RBP15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 SLC6A11P48066 632 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 SHC2P98077 582 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 MESP2Q0VG99 397 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 IFRD2Q12894 506 aaPredicted RBP15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 BIRC3Q13489 604 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 C11orf74Q86VG3 221 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 SFTPA1Q8IWL2 248 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 CCDC33Q8N5R6 958 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 MDGA1Q8NFP4 955 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 PLEKHO2Q8TD55 490 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 B3GNT5Q9BYG0 378 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 CFAP97Q9P2B7 532 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 NFE2L3Q9Y4A8 694 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 USP24Q9UPU5 2620 aa15.68■□□□□ 0.1
NPLOC4-207ENST00000572346 LAMA1P25391 3075 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 LNP1A1A4G5 178 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 SMTNL1A8MU46 457 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 BECN2A8MW95 431 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 A8MXQ7 604 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 IKBKBO14920 756 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 TRIM49P0CI25 452 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 TRIM49CP0CI26 452 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 MBL2P11226 248 aaPredicted RBP15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 CHRM1P11229 460 aaPredicted RBP15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 HNRNPLP14866 589 aaKnown RBP eCLIP15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 BCKDHBP21953 392 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 EIF2DP41214 584 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 ZNF165P49910 485 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 MYL6P60660 151 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 DLG4P78352 724 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 MRPS21P82921 87 aaKnown RBP15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 MYL5Q02045 173 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 ENPEPQ07075 957 aa15.67■□□□□ 0.1
NPLOC4-207ENST00000572346 TRPC3Q13507 836 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms