RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 EXOC4Q96A65 974 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 SEMA4AQ9H3S1 761 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 CLSTN2Q9H4D0 955 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 PNPLA8Q9NP80 782 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 RWDD2AQ9UIY3 292 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 NAGPAQ9UK23 515 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 TSPAN16Q9UKR8 245 aa18.74■□□□□ 0.59
CTDNEP1-207ENST00000572043 TULP2O00295 520 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 FGFR1OPO95684 399 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 CALCAP01258 141 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 AFPP02771 609 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 DRD1P21728 446 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 ATP5C1P36542 298 aaKnown RBP18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 SGO2Q562F6 1265 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 MAMSTRQ6ZN01 415 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 SCD5Q86SK9 330 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 ARHGEF19Q8IW93 802 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 BBS7Q8IWZ6 715 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 ANKRD52Q8NB46 1076 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 UBA3Q8TBC4 463 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 EZH1Q92800 747 aaPredicted RBP18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 NELL1Q92832 810 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 MED15Q96RN5 788 aa18.73■□□□□ 0.59
CTDNEP1-207ENST00000572043 E2F8A0AVK6 867 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 K7ESF4 209 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 CCDC192P0DO97 292 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 OPRD1P41143 372 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 SLC6A11P48066 632 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 PXNP49023 591 aaPredicted RBP18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 NRLP54845 237 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 SEC13P55735 322 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 SLC8A3P57103 927 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 PDE4CQ08493 712 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 LPAL2Q16609 132 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 GAB4Q2WGN9 574 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 C10orf120Q5SQS8 335 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 LY6G5CQ5SRR4 150 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 RHBDF2Q6PJF5 856 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 C12orf40Q86WS4 652 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 UBR7Q8N806 425 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 EHBP1Q8NDI1 1231 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 RPLP0P6Q8NHW5 317 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 LMO3Q8TAP4 145 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 NDRG1Q92597 394 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 CNOT6LQ96LI5 555 aaKnown RBP18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 KLF16Q9BXK1 252 aaPredicted RBP18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 CYLDQ9NQC7 956 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 TBC1D14Q9P2M4 693 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 HESX1Q9UBX0 185 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 GREB1Q4ZG55 1949 aa18.72■□□□□ 0.59
CTDNEP1-207ENST00000572043 KIF26AQ9ULI4 1882 aaPredicted RBP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 DENND4CQ5VZ89 1909 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 ANTXRLA6NF34 631 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 RNF225M0QZC1 329 aaPredicted RBP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 PMM2O15305 246 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 P4HA2O15460 535 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 ADH1CP00326 375 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 VDRP11473 427 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 ADH5P11766 374 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 TKTL1P51854 596 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 SRSF5Q13243 272 aaKnown RBP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 CCDC186Q7Z3E2 898 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 MIB1Q86YT6 1006 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 DCLK2Q8N568 766 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 TFAP2BQ92481 460 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 FAM126AQ9BYI3 521 aaPredicted RBP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 INTS2Q9H0H0 1204 aaKnown RBP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 FAM124BQ9H5Z6 455 aaPredicted RBP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 RASAL2Q9UJF2 1139 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 USP3Q9Y6I4 520 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 PATJQ8NI35 1801 aa18.71■□□□□ 0.59
CTDNEP1-207ENST00000572043 O00370 1275 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 LILRB5O75023 590 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 RALAP11233 206 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 BRD2P25440 801 aaKnown RBP18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 BCAT1P54687 386 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 MARSP56192 900 aaKnown RBP18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 KDSRQ06136 332 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 ANO4Q32M45 955 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 PRR23BQ6ZRT6 265 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 SFTPA1Q8IWL2 248 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 KIAA1958Q8N8K9 716 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 NAT16Q8N8M0 369 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 MLKLQ8NB16 471 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 SUMF1Q8NBK3 374 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 RBBP8NLQ8NC74 664 aaPredicted RBP18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 CRACR2AQ9BSW2 395 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 ULBP1Q9BZM6 244 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 LRRC4Q9HBW1 653 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 DNMT3LQ9UJW3 386 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 SMG5Q9UPR3 1016 aaKnown RBP18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 SLC8A2Q9UPR5 921 aa18.7■□□□□ 0.58
CTDNEP1-207ENST00000572043 PIK3R2O00459 728 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 XPO1O14980 1071 aaKnown RBP18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 ATG13O75143 517 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 HMBSP08397 361 aa18.69■□□□□ 0.58
CTDNEP1-207ENST00000572043 GOLGA8FQ08AF8 430 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms