RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MSS51Q4VC12 460 aa16.86■□□□□ 0.29
RAB40B-206ENST00000571995 SDHAF4Q5VUM1 108 aa16.86■□□□□ 0.29
RAB40B-206ENST00000571995 NIFKQ9BYG3 293 aaKnown RBP16.86■□□□□ 0.29
RAB40B-206ENST00000571995 SIX4Q9UIU6 781 aa16.86■□□□□ 0.29
RAB40B-206ENST00000571995 COL4A5P29400 1685 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 SMPD1P17405 629 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 CDKN2BP42772 138 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 DRG2P55039 364 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 MBTD1Q05BQ5 628 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 DEUP1Q05D60 604 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 MTHFD1LQ6UB35 978 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 NDUFAF2Q8N183 169 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 PDCD7Q8N8D1 485 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 CCDC124Q96CT7 223 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 SGF29Q96ES7 293 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 EPB41L4BQ9H329 900 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 CYP4F11Q9HBI6 524 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 XPOTO43592 962 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 EIF4BP23588 611 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 MLH1P40692 756 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 GEMIN4P57678 1058 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 RTP1P59025 263 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 MTDHQ86UE4 582 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 DEFB106AQ8N104 65 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 FAM193BQ96PV7 902 aaPredicted RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 CNPY3Q9BT09 278 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 RSAD1Q9HA92 442 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 AP4E1Q9UPM8 1137 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 AP1G2O75843 785 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 ALDH18A1P54886 795 aaKnown RBP16.85■□□□□ 0.29
RAB40B-206ENST00000571995 ZNF484Q5JVG2 852 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 CEP128Q6ZU80 1094 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 ALLCQ8N6M5 410 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 PDZD7Q9H5P4 517 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 UBR3Q6ZT12 1888 aa16.85■□□□□ 0.29
RAB40B-206ENST00000571995 DIAPH2O60879 1101 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 NDUFV1P49821 464 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 CFAP61Q8NHU2 1237 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 OLIG1Q8TAK6 271 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 GPR152Q8TDT2 470 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 N4BP2L2Q92802 583 aaPredicted RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 TTC25Q96NG3 672 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 PARK7Q99497 189 aaKnown RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 SNRNP25Q9BV90 132 aaKnown RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 CPSF2Q9P2I0 782 aaKnown RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 NENFQ9UMX5 172 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 IQANK1A0A1B0GTG1 560 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 SIGLEC16A6NMB1 481 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 SNX3O60493 162 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 CYP2F1P24903 491 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 EPHB2P29323 1055 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 GRIA1P42261 906 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 SARNPP82979 210 aaKnown RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 ZNF252P-AS1Q0IIN9 211 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 SYDE1Q6ZW31 735 aaPredicted RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 XYLT1Q86Y38 959 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 ARID3BQ8IVW6 561 aaPredicted RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 ADGRF2Q8IZF7 708 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 UNC5BQ8IZJ1 945 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 ZCCHC9Q8N567 271 aaKnown RBP16.84■□□□□ 0.29
RAB40B-206ENST00000571995 TLCD1Q96CP7 247 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 TMEM63AO94886 807 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 MCL1Q07820 350 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 OLIG2Q13516 323 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 DPYSL3Q14195 570 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 KCNT2Q6UVM3 1135 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 RSPH3Q86UC2 560 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 KRT82Q9NSB4 513 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 TNFSF13BQ9Y275 285 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 MFHAS1Q9Y4C4 1052 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 SNX10Q9Y5X0 201 aa16.84■□□□□ 0.29
RAB40B-206ENST00000571995 KRT37O76014 449 aa16.83■□□□□ 0.29
RAB40B-206ENST00000571995 TOP3BO95985 862 aaKnown RBP16.83■□□□□ 0.29
RAB40B-206ENST00000571995 USP17L7P0C7H9 530 aa16.83■□□□□ 0.29
RAB40B-206ENST00000571995 LOC100653049A0A140TA62 436 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 KRT34O76011 436 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 LSM8O95777 96 aaKnown RBP16.83■□□□□ 0.28
RAB40B-206ENST00000571995 ENO1P06733 434 aaKnown RBP16.83■□□□□ 0.28
RAB40B-206ENST00000571995 FOXN2P32314 431 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 SOX11P35716 441 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 PPIL2Q13356 520 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 VSTM1Q6UX27 236 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 MIB1Q86YT6 1006 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 ABI1Q8IZP0 508 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 STMN2Q93045 179 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 PDLIM7Q9NR12 457 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 ABI2Q9NYB9 513 aaPredicted RBP16.83■□□□□ 0.28
RAB40B-206ENST00000571995 KPNA7A9QM74 516 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 UGT1A9O60656 530 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 PDHA1P08559 390 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 SMIM10L2AP0DMW4 78 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 SMIM10L2BP0DMW5 78 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 GOT1P17174 413 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 GMPRP36959 345 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 ARFIP2P53365 341 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 TAP1Q03518 808 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
RAB40B-206ENST00000571995 FUKQ8N0W3 1084 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms