RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 YWHABP31946 246 aaKnown RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 QARSP47897 775 aaKnown RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 NPTX2P47972 431 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 SERPINB8P50452 374 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 APOFQ13790 326 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 DPYSL3Q14195 570 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 USP41Q3LFD5 358 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 ARCQ7LC44 396 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 PPM1NQ8N819 430 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 HIPK4Q8NE63 616 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 ABTB1Q969K4 478 aaPredicted RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 ZNF778Q96MU6 729 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 SLC13A1Q9BZW2 595 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 Q9H521 79 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 RAB26Q9ULW5 256 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 PCDHGB4Q9UN71 923 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 AGTPBP1Q9UPW5 1226 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 PCDHGB5Q9Y5G0 923 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 LTBP1Q14766 1721 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 ARHGAP10A1A4S6 786 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 DHX15O43143 795 aaKnown RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 TNFAIP8O95379 198 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 GDF11O95390 407 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 CUL2Q13617 745 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 PIGHQ14442 188 aaPredicted RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 ZACNQ401N2 412 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 FAM102BQ5T8I3 360 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 LMBRD2Q68DH5 695 aaPredicted RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 POLNQ7Z5Q5 900 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 NUP93Q8N1F7 819 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 NIPA2Q8N8Q9 360 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 PKD2L1Q9P0L9 805 aa17.46■□□□□ 0.39
LITAF-209ENST00000571688 HNRNPCP07910 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
LITAF-209ENST00000571688 ITGB5P18084 799 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 ITGAXP20702 1163 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 SLC5A2P31639 672 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 MAGEA10P43363 369 aaPredicted RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 MYBPC1Q00872 1141 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CBLBQ13191 982 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 TMED1Q13445 227 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 DNAJC24Q6P3W2 148 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 HHIPL2Q6UWX4 724 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 ZCCHC23Q6ZST2 131 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 HPS6Q86YV9 775 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 WDR75Q8IWA0 830 aaKnown RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 ARHGEF1Q92888 912 aaKnown RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 TEKT1Q969V4 418 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 C6orf203Q9P0P8 240 aaPredicted RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 BTBD7Q9P203 1132 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CNTN6Q9UQ52 1028 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CXorf49A8MYA2 514 aaPredicted RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 SIN3BO75182 1162 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CLDN10P78369 228 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CREB5Q02930 508 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 SPP2Q13103 211 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 KCNJ11Q14654 390 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 TCHHL1Q5QJ38 904 aaPredicted RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 DCUN1D2Q6PH85 259 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CTAGE3PQ8IX95 158 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 PQLC1Q8N2U9 271 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 FBXW8Q8N3Y1 598 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 FAM71DQ8N9W8 422 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 GFM2Q969S9 779 aaKnown RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 APOL6Q9BWW8 343 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CYP4F11Q9HBI6 524 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 TMEM165Q9HC07 324 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 APOBEC3GQ9HC16 384 aaKnown RBP17.45■□□□□ 0.38
LITAF-209ENST00000571688 PI4KBQ9UBF8 816 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 PSMD13Q9UNM6 376 aa17.45■□□□□ 0.38
LITAF-209ENST00000571688 CALB1P05937 261 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 TAZQ16635 292 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 LGSNQ5TDP6 509 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 TDRD10Q5VZ19 366 aaKnown RBP17.44■□□□□ 0.38
LITAF-209ENST00000571688 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 DEFB107AQ8IZN7 70 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 PIWIL2Q8TC59 973 aaKnown RBP17.44■□□□□ 0.38
LITAF-209ENST00000571688 DDI1Q8WTU0 396 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 FAM213AQ9BRX8 229 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 NRDE2Q9H7Z3 1164 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 TRMUO75648 421 aaKnown RBP17.44■□□□□ 0.38
LITAF-209ENST00000571688 CRTAMO95727 393 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 C4BPAP04003 597 aaKnown RBP17.44■□□□□ 0.38
LITAF-209ENST00000571688 ATP6V1B1P15313 513 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 CRHR1P34998 444 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 STAT2P52630 851 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 MTTPP55157 894 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 KRT81Q14533 505 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 ABCB5Q2M3G0 1257 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 CRY2Q49AN0 593 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 SH3D19Q5HYK7 790 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 ZBTB8BQ8NAP8 495 aaPredicted RBP17.44■□□□□ 0.38
LITAF-209ENST00000571688 CFAP36Q96G28 342 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 KCNH7Q9NS40 1196 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 ZBTB21Q9ULJ3 1066 aa17.44■□□□□ 0.38
LITAF-209ENST00000571688 APOBEC2Q9Y235 224 aaKnown RBP17.44■□□□□ 0.38
LITAF-209ENST00000571688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.43■□□□□ 0.38
LITAF-209ENST00000571688 SPDYE16A6NNV3 312 aaPredicted RBP17.43■□□□□ 0.38
LITAF-209ENST00000571688 FAM189A1O60320 539 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms