RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 B3GALNT2Q8NCR0 500 aa18.13■□□□□ 0.49
RPAIN-208ENST00000571043 BBOF1Q8ND07 529 aa18.13■□□□□ 0.49
RPAIN-208ENST00000571043 CCHCR1Q8TD31 782 aa18.13■□□□□ 0.49
RPAIN-208ENST00000571043 CCDC114Q96M63 670 aa18.13■□□□□ 0.49
RPAIN-208ENST00000571043 PSD3Q9NYI0 1048 aa18.13■□□□□ 0.49
RPAIN-208ENST00000571043 ASIC3Q9UHC3 531 aa18.13■□□□□ 0.49
RPAIN-208ENST00000571043 COL4A6Q14031 1691 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 GABBR2O75899 941 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 ADORA2BP29275 332 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 RNASELQ05823 741 aaKnown RBP18.12■□□□□ 0.49
RPAIN-208ENST00000571043 ADCY2Q08462 1091 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 SLMAPQ14BN4 828 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 KCTD19Q17RG1 926 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-208ENST00000571043 GLIPR1L2Q4G1C9 344 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 TRNP1Q6NT89 227 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 FAM117BQ6P1L5 589 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 BBS12Q6ZW61 710 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 HERC6Q8IVU3 1022 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 COLGALT2Q8IYK4 626 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 SLC2A14Q8TDB8 520 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 KHSRPQ92945 711 aaKnown RBP eCLIP18.12■□□□□ 0.49
RPAIN-208ENST00000571043 NKD2Q969F2 451 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-208ENST00000571043 ZBTB9Q96C00 473 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 SNF8Q96H20 258 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 PIWIL1Q96J94 861 aaKnown RBP18.12■□□□□ 0.49
RPAIN-208ENST00000571043 SENP8Q96LD8 212 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 LPIN3Q9BQK8 851 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 UBE2OQ9C0C9 1292 aaKnown RBP18.12■□□□□ 0.49
RPAIN-208ENST00000571043 TSPYL1Q9H0U9 437 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 NFS1Q9Y697 457 aa18.12■□□□□ 0.49
RPAIN-208ENST00000571043 PIK3R2O00459 728 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 XPO1O14980 1071 aaKnown RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 ATP2A2P16615 1042 aaKnown RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 PTPN1P18031 435 aaKnown RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 IVDP26440 423 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 LHX1P48742 406 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 SLC8A3P57103 927 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 BYSLQ13895 437 aaKnown RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 UPP1Q16831 310 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 CCDC14Q49A88 953 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 WSCD1Q658N2 575 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 SLC26A9Q7LBE3 791 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 CMTR2Q8IYT2 770 aaKnown RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 KCTD6Q8NC69 237 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 SPATA18Q8TC71 538 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 UBLCP1Q8WVY7 318 aaPredicted RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 ACSF2Q96CM8 615 aaPredicted RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 FAM193BQ96PV7 902 aaPredicted RBP18.11■□□□□ 0.49
RPAIN-208ENST00000571043 NRDE2Q9H7Z3 1164 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 FAM204AQ9H8W3 233 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 PCSK1NQ9UHG2 260 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 ATP8A1Q9Y2Q0 1164 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 INSL6Q9Y581 213 aa18.11■□□□□ 0.49
RPAIN-208ENST00000571043 GOLGA6CA6NDK9 693 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 B4GALT3O60512 393 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 ENDOD1O94919 500 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 GOLGA6DP0CG33 693 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 ATF2P15336 505 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 SDC4P31431 198 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 BMP8BP34820 402 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 CLCNKBP51801 687 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 PMS2P54278 862 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 VCPP55072 806 aaKnown RBP18.1■□□□□ 0.49
RPAIN-208ENST00000571043 EIF3BP55884 814 aaKnown RBP18.1■□□□□ 0.49
RPAIN-208ENST00000571043 SMTNL2Q2TAL5 461 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 BOLA3Q53S33 107 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 KCNT1Q5JUK3 1230 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 RHBDF2Q6PJF5 856 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 SCUBE3Q8IX30 993 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 LRRC43Q8N309 656 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 TEKT4Q8WW24 435 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 UROC1Q96N76 676 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 TBCBQ99426 244 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 RAD9AQ99638 391 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 DUSP16Q9BY84 665 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 GOLGA6AQ9NYA3 693 aa18.1■□□□□ 0.49
RPAIN-208ENST00000571043 PRPSAP2O60256 369 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 ALDH2P05091 517 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 ITGAVP06756 1048 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 RARGP13631 454 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 KLRC2P26717 231 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 PTPN9P43378 593 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 GYS2P54840 703 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 PAN2Q504Q3 1202 aaKnown RBP18.09■□□□□ 0.49
RPAIN-208ENST00000571043 DSTYKQ6XUX3 929 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 VSIG1Q86XK7 387 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 FUKQ8N0W3 1084 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 FAM76AQ8TAV0 307 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 SLC35B2Q8TB61 432 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 ARL8AQ96BM9 186 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 YME1L1Q96TA2 773 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 PAAF1Q9BRP4 392 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 ZBED2Q9BTP6 218 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 PABPC3Q9H361 631 aaKnown RBP18.09■□□□□ 0.49
RPAIN-208ENST00000571043 CWH43Q9H720 699 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 DNAJB4Q9UDY4 337 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 DNPEPQ9ULA0 475 aa18.09■□□□□ 0.49
RPAIN-208ENST00000571043 CASTOR2A6NHX0 329 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 GOLGA6L10A6NI86 522 aa18.08■□□□□ 0.49
RPAIN-208ENST00000571043 GRAP2O75791 330 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms