RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 RGL1Q9NZL6 768 aa8.75□□□□□ -1.01
CDH11-216ENST00000569128 GTF2A1LQ9UNN4 478 aa8.75□□□□□ -1.01
CDH11-216ENST00000569128 HPSEQ9Y251 543 aa8.75□□□□□ -1.01
CDH11-216ENST00000569128 NOC2LQ9Y3T9 749 aaKnown RBP8.75□□□□□ -1.01
CDH11-216ENST00000569128 TRIM17Q9Y577 477 aa8.75□□□□□ -1.01
CDH11-216ENST00000569128 CASP8AP2Q9UKL3 1982 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 FAM237AA0A1B0GTK4 181 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 GSTTP1A0A1W2PQM5 241 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 HRKO00198 91 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 MAFGO15525 162 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 PIP5K1CO60331 668 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 HSPA1AP0DMV8 641 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 HSPA1BP0DMV9 641 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 HOXD10P28358 340 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 LBX1P52954 281 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 CYP4A11Q02928 519 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 PPP2R5CQ13362 524 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 CTTNQ14247 550 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 PDIA5Q14554 519 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 TMEM266Q2M3C6 531 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 ATAT1Q5SQI0 421 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 CELF3Q5SZQ8 465 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 MIER3Q7Z3K6 550 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 KCNK18Q7Z418 384 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 MIB1Q86YT6 1006 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 FAM26EQ8N5C1 309 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 MSL3Q8N5Y2 521 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 ZNF610Q8N9Z0 462 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 ACRBPQ8NEB7 543 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 RAET1EQ8TD07 263 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 ATXN2LQ8WWM7 1075 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 CDHR1Q96JP9 859 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 EIF2AK1Q9BQI3 630 aaKnown RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 CCSER1Q9C0I3 900 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 EPB41L4BQ9H329 900 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 ABHD16BQ9H3Z7 469 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 TBC1D22BQ9NU19 505 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 WRAP73Q9P2S5 460 aaPredicted RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 SLC9A2Q9UBY0 812 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.74□□□□□ -1.01
CDH11-216ENST00000569128 NFASCO94856 1347 aa8.74□□□□□ -1.01
CDH11-216ENST00000569128 MYOCOSA0A1B0GUC4 107 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 A6NNZ2 444 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 POLR2DO15514 142 aaKnown RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 NBNO60934 754 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 FARP2O94887 1054 aaPredicted RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 SLITRK3O94933 977 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 ZNF202O95125 648 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 LRG1P02750 347 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 MMEP08473 750 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 TGFB3P10600 412 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 CYBAP13498 195 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 CCND3P30281 292 aaPredicted RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 MAN1A1P33908 653 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 CCT6AP40227 531 aaKnown RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 UBA7P41226 1012 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 ACTR2P61160 394 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 PSMC6P62333 389 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 SMAD3P84022 425 aaKnown RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 TNFAIP2Q03169 654 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 ARHGAP1Q07960 439 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 ZNF267Q14586 743 aaPredicted RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 EPHA7Q15375 998 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 SMAD2Q15796 467 aaKnown RBP8.73□□□□□ -1.01
CDH11-216ENST00000569128 MLANAQ16655 118 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 UGCGQ16739 394 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 LONRF1Q17RB8 773 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 HSDL1Q3SXM5 330 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 CATSPEREQ5SY80 951 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 MFSD14CQ5VZR4 134 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 CATSPER3Q86XQ3 398 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 ZNF354CQ86Y25 554 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 GRAMD1CQ8IYS0 662 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 SCFD2Q8WU76 684 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 STAMQ92783 540 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 DHX58Q96C10 678 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 PCYT2Q99447 389 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 SDF4Q9BRK5 362 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 SELENOOQ9BVL4 669 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 ZDHHC5Q9C0B5 715 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 MS4A5Q9H3V2 200 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 MLXIPQ9HAP2 919 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 SIRT5Q9NXA8 310 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 DACT1Q9NYF0 836 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 IPPQ9Y573 584 aa8.73□□□□□ -1.01
CDH11-216ENST00000569128 TMEM150BA6NC51 233 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 E9PMD0 336 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 CYP17A1P05093 508 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 CASP1P29466 404 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 SYKP43405 635 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 SARSP49591 514 aaKnown RBP8.72□□□□□ -1.01
CDH11-216ENST00000569128 NCKAP1LP55160 1127 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 ADKP55263 362 aaKnown RBP8.72□□□□□ -1.01
CDH11-216ENST00000569128 NEDD9Q14511 834 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 DUSP28Q4G0W2 176 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 TMEM119Q4V9L6 283 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 RRAGBQ5VZM2 374 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 KRT79Q5XKE5 535 aa8.72□□□□□ -1.01
CDH11-216ENST00000569128 SWSAP1Q6NVH7 229 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms