RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 PNMA8CA0A1B0GUJ8 204 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 CFAP99D6REC4 459 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 GOLGA8RI6L899 631 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 KPNA4O00629 521 aaPredicted RBP4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 ATP9BO43861 1147 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 IFNA14P01570 189 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 CACNA2D1P54289 1103 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 NSUN2Q08J23 767 aaKnown RBP eCLIP4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 MAD2L1Q13257 205 aaPredicted RBP4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 XRCC4Q13426 336 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 RBBP7Q16576 425 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 GRTP1Q5TC63 336 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 SNX30Q5VWJ9 437 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 PTF1AQ7RTS3 328 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 NT5DC3Q86UY8 548 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 KSR1Q8IVT5 923 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 TAGAPQ8N103 731 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 SVOPQ8N4V2 548 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 AADATQ8N5Z0 425 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 FBXO36Q8NEA4 188 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 MDM1Q8TC05 714 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 ACMSDQ8TDX5 336 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 SPATA33Q96N06 139 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM111AQ96PZ2 611 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 PRRG3Q9BZD7 231 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 DCLK3Q9C098 648 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 CPVLQ9H3G5 476 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 RMND5AQ9H871 391 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 LMCD1Q9NZU5 365 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 HAO1Q9UJM8 370 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 TMCO1Q9UM00 188 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 UBQLN1Q9UMX0 589 aaKnown RBP4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 NAALADL1Q9UQQ1 740 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 EIF3LQ9Y262 564 aaKnown RBP4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 COMMD3-BMI1R4GMX3 469 aa4.5□□□□□ -1.69
LPCAT2-208ENST00000566915 NCANO14594 1321 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 A0A087WXM4 84 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 UBE2Q2LH0YL09 131 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF263O14978 683 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 MSH4O15457 936 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SNX3O60493 162 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ERBB2P04626 1255 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ICAM1P05362 532 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 PSMA3P25788 255 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 KCNJ1P48048 391 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 LBRQ14739 615 aaKnown RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ATF7IP2Q5U623 682 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SCARA3Q6AZY7 606 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 TTC27Q6P3X3 843 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 KATNAL2Q8IYT4 538 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 DCP1BQ8IZD4 617 aaKnown RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ABRAQ8N0Z2 381 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SETD9Q8NE22 299 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF184Q99676 751 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 TMEM120AQ9BXJ8 343 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 MAF1Q9H063 256 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 PARVBQ9HBI1 364 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP39A1Q9NYL5 469 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 STMN3Q9NZ72 180 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 TJP2Q9UDY2 1190 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ZMYND8Q9ULU4 1186 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 MAPRE3Q9UPY8 281 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 TRIM17Q9Y577 477 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC30A1Q9Y6M5 507 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 NRAPQ86VF7 1730 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 CRYBG1Q9Y4K1 1723 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 FZD9O00144 591 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 UNC5CO95185 931 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 PLEKP08567 350 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 IL1R1P14778 569 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 CPA3P15088 417 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 NPY2RP49146 381 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 NUDT2P50583 147 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 RAP1GDS1P52306 607 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 RAB15P59190 212 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ERVK-9P63128 1117 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SP3Q02447 781 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 TOP3AQ13472 1001 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 LAMC2Q13753 1193 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 VEPH1Q14D04 833 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 PKN1Q16512 942 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ANGPTL8Q6UXH0 198 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ARCQ7LC44 396 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 NET1Q7Z628 596 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC9A9Q8IVB4 645 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF280CQ8ND82 737 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 GPRC5AQ8NFJ5 357 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 WDR60Q8WVS4 1066 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF669Q96BR6 464 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ASIC4Q96FT7 647 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ELMO2Q96JJ3 720 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 OLFM1Q99784 485 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM153AQ9UHL3 310 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 CORO1CQ9ULV4 474 aaPredicted RBP4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 ACOT9Q9Y305 439 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 CLUHO75153 1309 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 NPHP3-ACAD11A0A0J9YXS1 232 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 SERPINI2O75830 405 aa4.49□□□□□ -1.69
LPCAT2-208ENST00000566915 GSNP06396 782 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms