RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TNFAIP3P21580 790 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 GABRR2P28476 465 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 CDC25CP30307 473 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 ACADSBP45954 432 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 NSFP46459 744 aaKnown RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 KIF11P52732 1056 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 TAF10Q12962 218 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 CBX2Q14781 532 aaPredicted RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 CLEC16AQ2KHT3 1053 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 SLC5A9Q2M3M2 681 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 LEXMQ3ZCV2 418 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 RAB41Q5JT25 222 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 WDR59Q6PJI9 974 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 GET4Q7L5D6 327 aaPredicted RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 PDZD8Q8NEN9 1154 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 STK32AQ8WU08 396 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 MYRFLQ96LU7 910 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 NECTIN4Q96NY8 510 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 CPXM1Q96SM3 734 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
KARS-207ENST00000566560 LRRC3Q9BY71 257 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 ULBP1Q9BZM6 244 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 DEF6Q9H4E7 631 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 CYLDQ9NQC7 956 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 COMMD8Q9NX08 183 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 GMIPQ9P107 970 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 ARHGAP20Q9P2F6 1191 aa12.07□□□□□ -0.48
KARS-207ENST00000566560 MRPS23Q9Y3D9 190 aaKnown RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 HELZP42694 1942 aaKnown RBP12.07□□□□□ -0.48
KARS-207ENST00000566560 NUP210Q8TEM1 1887 aaPredicted RBP12.06□□□□□ -0.48
KARS-207ENST00000566560 A0A1W2PRU2 124 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 FAM92AA1XBS5 289 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 DDX3XO00571 662 aaKnown RBP eCLIP12.06□□□□□ -0.481e-29■■■□□ 18.6
KARS-207ENST00000566560 ZNF197O14709 1029 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 MBTPS2O43462 519 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 FBXO21O94952 628 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 ZBED1O96006 694 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 ERBB2P04626 1255 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 USP17L7P0C7H9 530 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 CEBPBP17676 345 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 FSHRP23945 695 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 CCR2P41597 374 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 RPL34P49207 117 aaKnown RBP12.06□□□□□ -0.48
KARS-207ENST00000566560 GSDMDP57764 484 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 SNX16P57768 344 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 CYP4F8P98187 520 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 CENPCQ03188 943 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 TFF2Q03403 129 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 PRSS36Q5K4E3 855 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 WDTC1Q8N5D0 677 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 SHKBP1Q8TBC3 707 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 CPA5Q8WXQ8 436 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 ING5Q8WYH8 240 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 OVCA2Q8WZ82 227 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 SUSD6Q92537 303 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 TCEAL4Q96EI5 215 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 PANX2Q96RD6 677 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 C11orf70Q9BRQ4 267 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 MIS12Q9H081 205 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 ATXN3LQ9H3M9 355 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 POMKQ9H5K3 350 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 IL21Q9HBE4 155 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 AVENQ9NQS1 362 aaPredicted RBP12.06□□□□□ -0.48
KARS-207ENST00000566560 CNGB3Q9NQW8 809 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 TJP2Q9UDY2 1190 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 SCML2Q9UQR0 700 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 USP3Q9Y6I4 520 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 NCANO14594 1321 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 REV3LO60673 3130 aa12.06□□□□□ -0.48
KARS-207ENST00000566560 SSU72P8A0A1W2PR75 194 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 TMCO5BA8MYB1 307 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 NRG2O14511 850 aaPredicted RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 SART1O43290 800 aaKnown RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 UNGP13051 313 aaPredicted RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 GJA1P17302 382 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 EIF4A3P38919 411 aaKnown RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 DAOAP59103 153 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 CDK17Q00537 523 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 TEAD2Q15562 447 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 ARHGAP15Q53QZ3 475 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 PTCRAQ6ISU1 281 aaPredicted RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 PPP1R2P3Q6NXS1 205 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 MMS22LQ6ZRQ5 1243 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 GAREM2Q75VX8 874 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 TMEM150AQ86TG1 271 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 ERICH1Q86X53 443 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 SLC30A5Q8TAD4 765 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 ITFG1Q8TB96 612 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 MRPS31Q92665 395 aaKnown RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 CHP1Q99653 195 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 TLR8Q9NR97 1041 aaKnown RBP12.05□□□□□ -0.48
KARS-207ENST00000566560 TRPM5Q9NZQ8 1165 aa12.05□□□□□ -0.48
KARS-207ENST00000566560 FAM50BQ9Y247 325 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms