RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 MTHFD1LQ6UB35 978 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 TIFABQ6ZNK6 161 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 CRLF3Q8IUI8 442 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 FAM71DQ8N9W8 422 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 REPS2Q8NFH8 660 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 SPATA18Q8TC71 538 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 WDR60Q8WVS4 1066 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 TFAP2BQ92481 460 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 TMEM143Q96AN5 459 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 NMUR2Q9GZQ4 415 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 RPAP3Q9H6T3 665 aaPredicted RBP22.46■■□□□ 1.19
SPSB3-208ENST00000566339 CPSF2Q9P2I0 782 aaKnown RBP22.46■■□□□ 1.19
SPSB3-208ENST00000566339 SSX2IPQ9Y2D8 614 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 TTLL3Q9Y4R7 772 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 ZNF487B1APH4 448 aa22.45■■□□□ 1.19
SPSB3-208ENST00000566339 GAS2O43903 313 aaKnown RBP22.45■■□□□ 1.19
SPSB3-208ENST00000566339 GNAT1P11488 350 aa22.45■■□□□ 1.19
SPSB3-208ENST00000566339 CRABP2P29373 138 aa22.45■■□□□ 1.19
SPSB3-208ENST00000566339 THOC5Q13769 683 aaKnown RBP22.45■■□□□ 1.19
SPSB3-208ENST00000566339 EXOC8Q8IYI6 725 aa22.45■■□□□ 1.19
SPSB3-208ENST00000566339 KLF6Q99612 283 aaPredicted RBP22.45■■□□□ 1.19
SPSB3-208ENST00000566339 NRBP2Q9NSY0 501 aa22.45■■□□□ 1.19
SPSB3-208ENST00000566339 TRIM49D1C9J1S8 452 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 SNNO75324 88 aaPredicted RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 TGM2P21980 687 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 ASPAP45381 313 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 TUBP50607 506 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 CACNA2D1P54289 1103 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 SESN3P58005 492 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 PDK2Q15119 407 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 TARBP2Q15633 366 aaKnown RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 ZNF699Q32M78 642 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 DENND1BQ6P3S1 775 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 DARS2Q6PI48 645 aaKnown RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 ZC3H18Q86VM9 953 aaKnown RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 XYLT1Q86Y38 959 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 DHX37Q8IY37 1157 aaKnown RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 NIM1KQ8IY84 436 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 JOSD2Q8TAC2 188 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 ACSF2Q96CM8 615 aaPredicted RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 VCX3BQ9H321 246 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 KRT82Q9NSB4 513 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 ZDHHC7Q9NXF8 308 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 CPSF3Q9UKF6 684 aaKnown RBP22.45■■□□□ 1.18
SPSB3-208ENST00000566339 ADAMTS5Q9UNA0 930 aa22.45■■□□□ 1.18
SPSB3-208ENST00000566339 B4GALT4O60513 344 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 TNNC2P02585 160 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 AOC1P19801 751 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 CRHR1P34998 444 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 DYNC1I2Q13409 638 aaKnown RBP22.44■■□□□ 1.18
SPSB3-208ENST00000566339 TNFAIP1Q13829 316 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 TEX44Q53QW1 395 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 CYP4A22Q5TCH4 519 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 IGDCC3Q8IVU1 814 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 MAP7D3Q8IWC1 876 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 FAF2Q96CS3 445 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 FAM161BQ96MY7 647 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 CCDC106Q9BWC9 280 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 USP18Q9UMW8 372 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 C2CD2Q9Y426 696 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 DOCK5Q9H7D0 1870 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 LCTP09848 1927 aa22.44■■□□□ 1.18
SPSB3-208ENST00000566339 FAM237BA0A1B0GVD1 139 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 BCLAF3A2AJT9 711 aaKnown RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 MYL4P12829 197 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 ANPEPP15144 967 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 MIPP30301 263 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 TMPRSS15P98073 1019 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 HNRNPDQ14103 355 aaKnown RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.43■■□□□ 1.181e-7■■■□□ 19
SPSB3-208ENST00000566339 ACMSDQ8TDX5 336 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 BCO2Q9BYV7 579 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 KLC2Q9H0B6 622 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 SDCBP2Q9H190 292 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 XYLT2Q9H1B5 865 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 NDE1Q9NXR1 346 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 SAE1Q9UBE0 346 aaPredicted RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 SLC4A7Q9Y6M7 1214 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 DDNO94850 711 aaPredicted RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 PIM1P11309 404 aaPredicted RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 OSBPP22059 807 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 YWHAZP63104 245 aaKnown RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 DSG1Q02413 1049 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 CXCL9Q07325 125 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 BST1Q10588 318 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 CAPSQ13938 189 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 UCMAQ8WVF2 138 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 PPP2R3CQ969Q6 453 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 ANKRD36BP1Q96IX9 119 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 C12orf42Q96LP6 360 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 GCOM2Q9BZD3 368 aaPredicted RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 MTMR12Q9C0I1 747 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 ASCC2Q9H1I8 757 aaPredicted RBP22.43■■□□□ 1.18
SPSB3-208ENST00000566339 C2orf40Q9H1Z8 148 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 POPDC2Q9HBU9 364 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 MYOZ2Q9NPC6 264 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 THAP1Q9NVV9 213 aa22.43■■□□□ 1.18
SPSB3-208ENST00000566339 EME2A4GXA9 379 aaPredicted RBP22.42■■□□□ 1.18
SPSB3-208ENST00000566339 KLHL2O95198 593 aa22.42■■□□□ 1.18
SPSB3-208ENST00000566339 CLCN2P51788 898 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms