RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 WHRNQ9P202 907 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 RCOR3Q9P2K3 495 aaPredicted RBP9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 STAP1Q9ULZ2 295 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 NFU1Q9UMS0 254 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 INPP5FQ9Y2H2 1132 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 PCDHB7Q9Y5E2 793 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 NLRC5Q86WI3 1866 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ZSCAN5CA6NGD5 496 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 OR6C75A6NL08 312 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 APOC4-APOC2K7ER74 178 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 LIASO43766 372 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ZNF189O75820 626 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 AP1G2O75843 785 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 DDHD2O94830 711 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 EFEMP2O95967 443 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 APOC2P02655 101 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ITGAVP06756 1048 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 HOXB3P14651 431 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ITIH2P19823 946 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 FGFR3P22607 806 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 IGFBP6P24592 240 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ACAT1P24752 427 aaKnown RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 MAGEA11P43364 429 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 BRCC3P46736 316 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 GJA8P48165 433 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 VCPP55072 806 aaKnown RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 HDAC4P56524 1084 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 DAOAP59103 153 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 YWHAZP63104 245 aaKnown RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 YWHAHQ04917 246 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ADIGQ0VDE8 80 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 MTMR3Q13615 1198 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 OASLQ15646 514 aaKnown RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 DPYSL2Q16555 572 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 NFE2Q16621 373 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ATP13A4Q4VNC1 1196 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 DAB2IPQ5VWQ8 1189 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 TXNRD3NBQ6F5E7 133 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 CNKSR3Q6P9H4 555 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 SND1Q7KZF4 910 aaKnown RBP eCLIP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ANKS1BQ7Z6G8 1248 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ZNF280BQ86YH2 543 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 SCUBE3Q8IX30 993 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 DCP1BQ8IZD4 617 aaKnown RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ABI1Q8IZP0 508 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM172AQ8WUF8 416 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 MYLPFQ96A32 169 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 NTAN1Q96AB6 310 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 CEP295NLQ96MC4 621 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM193BQ96PV7 902 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 HS3ST6Q96QI5 342 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 PEBP4Q96S96 227 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 NPY6RQ99463 290 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 LPIN3Q9BQK8 851 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 MED10Q9BTT4 135 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 COLEC11Q9BWP8 271 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 ZCWPW1Q9H0M4 648 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 POPDC2Q9HBU9 364 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 CHST7Q9NS84 486 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 MICAL3Q7RTP6 2002 aa9.26□□□□□ -0.93
LSM3P5-201ENST00000566307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 ESYT3A0FGR9 886 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 SMAPO00193 183 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 DAPK3O43293 454 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 B4GALT3O60512 393 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 PQBP1O60828 265 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 EFCAB14O75071 495 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 PPFIA2O75334 1257 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 F9P00740 461 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 LCP1P13796 627 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TGM2P21980 687 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 IVDP26440 423 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TKTL1P51854 596 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM193AP78312 1265 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TLE2Q04725 743 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 SCAPQ12770 1279 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 CBLBQ13191 982 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 BYSLQ13895 437 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TAF5Q15542 800 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 C15orf59Q2T9L4 293 aaPredicted RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 ERMARDQ5T6L9 678 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 SLC9A4Q6AI14 798 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 VSTM1Q6UX27 236 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 LRIG3Q6UXM1 1119 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 CEP128Q6ZU80 1094 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 ADAT2Q7Z6V5 191 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 IQCKQ8N0W5 287 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 SIX6OS1Q8N1H7 587 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 LRRC43Q8N309 656 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 ALLCQ8N6M5 410 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 KCTD6Q8NC69 237 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 OR10T2Q8NGX3 314 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 C2orf15Q8WU43 125 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 C1orf54Q8WWF1 131 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 IFT81Q8WYA0 676 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 ART4Q93070 314 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms