RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 WHAMMP3Q1A5X7 153 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 C15orf59Q2T9L4 293 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-213ENST00000565834 HFE2Q6ZVN8 426 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 BHLHA9Q7RTU4 235 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 SPRED2Q7Z698 418 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 RHOT1Q8IXI2 618 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 DEFB106AQ8N104 65 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 SPPL3Q8TCT6 385 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 POF1BQ8WVV4 589 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 ALG3Q92685 438 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 CAPZA3Q96KX2 299 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 SLC2A13Q96QE2 648 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 TGS1Q96RS0 853 aaKnown RBP19.62■□□□□ 0.73
COMMD4-213ENST00000565834 DDX23Q9BUQ8 820 aaKnown RBP19.62■□□□□ 0.73
COMMD4-213ENST00000565834 CES2O00748 559 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 LRCH4O75427 683 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 RTN3O95197 1032 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-213ENST00000565834 CNPP09543 421 aaKnown RBP19.62■□□□□ 0.73
COMMD4-213ENST00000565834 PEX5P50542 639 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 ATP11AP98196 1134 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 CDO1Q16878 200 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 DENND5BQ6ZUT9 1274 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 STKLD1Q8NE28 680 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 GPR152Q8TDT2 470 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 CEP295NLQ96MC4 621 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 TRIM62Q9BVG3 475 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 CYP4F11Q9HBI6 524 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 TLR9Q9NR96 1032 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 MAFFQ9ULX9 164 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 YBX2Q9Y2T7 364 aaKnown RBP19.62■□□□□ 0.73
COMMD4-213ENST00000565834 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-213ENST00000565834 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-213ENST00000565834 CAPN9O14815 690 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 SEC24AO95486 1093 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 ELF1P32519 619 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 NOS2P35228 1153 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 GJC1P36383 396 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 RWDD2BP57060 319 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 ERVFC1P60507 584 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 SMC1AQ14683 1233 aaKnown RBP19.61■□□□□ 0.73
COMMD4-213ENST00000565834 DCAF6Q58WW2 860 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 ARFGAP1Q8N6T3 406 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 FAM172AQ8WUF8 416 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 CARD9Q9H257 536 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 NGRNQ9NPE2 291 aaKnown RBP19.61■□□□□ 0.73
COMMD4-213ENST00000565834 STAP1Q9ULZ2 295 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 SCML2Q9UQR0 700 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 IRAK3Q9Y616 596 aa19.61■□□□□ 0.73
COMMD4-213ENST00000565834 RIOK3O14730 519 aaKnown RBP19.6■□□□□ 0.73
COMMD4-213ENST00000565834 ADH1AP07327 375 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 TCF4P15884 667 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 ATF6P18850 670 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 DNAJB1P25685 340 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 PCK1P35558 622 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 ERVK-21P61565 698 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 HADHQ16836 314 aaKnown RBP19.6■□□□□ 0.73
COMMD4-213ENST00000565834 SH3PXD2AQ5TCZ1 1133 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 LRRC38Q5VT99 294 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 DCAF12L1Q5VU92 463 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 PLPP4Q5VZY2 271 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 NCAPGQ9BPX3 1015 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 EMILIN2Q9BXX0 1053 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 COMMD8Q9NX08 183 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 IL37Q9NZH6 218 aa19.6■□□□□ 0.73
COMMD4-213ENST00000565834 PRRG1O14668 218 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 CEP104O60308 925 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 LPXNO60711 386 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 CSPG5O95196 566 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 FYNP06241 537 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 NCAM1P13591 858 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 YWHAQP27348 245 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 MIPP30301 263 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 PBX2P40425 430 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 SULT1E1P49888 294 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 YWHAGP61981 247 aaKnown RBP eCLIP19.59■□□□□ 0.73
COMMD4-213ENST00000565834 USP46P62068 366 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 CKAP4Q07065 602 aaKnown RBP19.59■□□□□ 0.73
COMMD4-213ENST00000565834 SLC25A52Q3SY17 297 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 CCDC181Q5TID7 509 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 BSPRYQ5W0U4 402 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 CREG2Q8IUH2 290 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 TCEAL8Q8IYN2 117 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 GIPC2Q8TF65 315 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 KLHL5Q96PQ7 755 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 PBX4Q9BYU1 374 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 MSRAQ9UJ68 235 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 NAALADL1Q9UQQ1 740 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 YIPF1Q9Y548 306 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 SLC38A8A6NNN8 435 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 GRM6O15303 877 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 TFE3P19532 575 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-213ENST00000565834 ALDH1A3P47895 512 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 SLC25A11Q02978 314 aaKnown RBP19.59■□□□□ 0.73
COMMD4-213ENST00000565834 RAB30Q15771 203 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 POLNQ7Z5Q5 900 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 MON1AQ86VX9 555 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 KATNAL2Q8IYT4 538 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 MRPL43Q8N983 215 aaKnown RBP19.59■□□□□ 0.73
COMMD4-213ENST00000565834 MICAL1Q8TDZ2 1067 aa19.59■□□□□ 0.73
COMMD4-213ENST00000565834 CENPIQ92674 756 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms