RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 PRR7Q8TB68 274 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 DNASE2BQ8WZ79 361 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 TMEM176AQ96HP8 235 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 MTMR9Q96QG7 549 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 PYM1Q9BRP8 204 aaKnown RBP11.92□□□□□ -0.5
CAPN3-215ENST00000565559 NRSN2Q9GZP1 204 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
CAPN3-215ENST00000565559 FTSJ1Q9UET6 329 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 BTBD3Q9Y2F9 522 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
CAPN3-215ENST00000565559 CITO14578 2027 aa11.92□□□□□ -0.5
CAPN3-215ENST00000565559 LACTBL1A8MY62 500 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 NCAM1P13591 858 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 MUTP22033 750 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 WASP42768 502 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 UCNP55089 124 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 TMPRSS3P57727 454 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 GAD2Q05329 585 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 MCL1Q07820 350 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 C9orf57Q5W0N0 161 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 KIAA1324Q6UXG2 1013 aaKnown RBP11.91□□□□□ -0.5
CAPN3-215ENST00000565559 ZPBP2Q6X784 338 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 PRICKLE2Q7Z3G6 844 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 HSCBQ8IWL3 235 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 SPACA3Q8IXA5 215 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 CHPFQ8IZ52 775 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 CADM4Q8NFZ8 388 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
CAPN3-215ENST00000565559 LRRC15Q8TF66 581 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 ABCB6Q9NP58 842 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 DEC1Q9P2X7 70 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
CAPN3-215ENST00000565559 KCNG1Q9UIX4 513 aa11.91□□□□□ -0.5
CAPN3-215ENST00000565559 MYO9AB2RTY4 2548 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 A0A1W2PQF6 199 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 SLC16A4O15374 487 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 PDCP20941 246 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 TNFSF9P41273 254 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 TAF6P49848 677 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 MMP16P51512 607 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 KCNH2Q12809 1159 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 MYO1EQ12965 1108 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 RTP5Q14D33 572 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 SF3A1Q15459 793 aaKnown RBP11.9□□□□□ -0.5
CAPN3-215ENST00000565559 PKDCCQ504Y2 493 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 WSCD1Q658N2 575 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 RHBDF2Q6PJF5 856 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 CD302Q8IX05 232 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-215ENST00000565559 BICD1Q96G01 975 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 TOE1Q96GM8 510 aaKnown RBP11.9□□□□□ -0.5
CAPN3-215ENST00000565559 LGMNQ99538 433 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 C17orf75Q9HAS0 396 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 TBC1D14Q9P2M4 693 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
CAPN3-215ENST00000565559 CEP192Q8TEP8 1941 aa11.9□□□□□ -0.51
CAPN3-215ENST00000565559 PIRO00625 290 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 HIP1RO75146 1068 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
CAPN3-215ENST00000565559 CYP2F1P24903 491 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 CCT8P50990 548 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 SMTNP53814 917 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 LY6DQ14210 128 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 TEAD4Q15561 434 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 COLEC12Q5KU26 742 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 LIAT1Q6ZQX7 453 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 DDX42Q86XP3 938 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAPN3-215ENST00000565559 PHTF2Q8N3S3 785 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 TERB1Q8NA31 727 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 MED8Q96G25 268 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 MRGPRX1Q96LB2 322 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 SEMA4CQ9C0C4 833 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 TMLHEQ9NVH6 421 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 TRPM5Q9NZQ8 1165 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 GMIPQ9P107 970 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 IL17BQ9UHF5 180 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 HEMK1Q9Y5R4 338 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-215ENST00000565559 CPQQ9Y646 472 aa11.89□□□□□ -0.51
CAPN3-215ENST00000565559 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
CAPN3-215ENST00000565559 KNTC1P50748 2209 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 DENND4CQ5VZ89 1909 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 MGAQ8IWI9 3026 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 A0A1B0GVT2 93 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 CFAP99D6REC4 459 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 H3BQV1 296 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 SCAMP3O14828 347 aaKnown RBP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 PCDHGA12O60330 932 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 JUNDP17535 347 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 ADSSP30520 456 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 CCT6AP40227 531 aaKnown RBP11.88□□□□□ -0.51
CAPN3-215ENST00000565559 SLC19A1P41440 591 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
CAPN3-215ENST00000565559 AFF3P51826 1226 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms