RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SLC25A52Q3SY17 297 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 DRICH1Q6PGQ1 229 aaPredicted RBP20.44■□□□□ 0.86
CLN6-205ENST00000564846 SND1Q7KZF4 910 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLN6-205ENST00000564846 SPATA2LQ8IUW3 424 aaPredicted RBP20.44■□□□□ 0.86
CLN6-205ENST00000564846 DCP1BQ8IZD4 617 aaKnown RBP20.44■□□□□ 0.86
CLN6-205ENST00000564846 DEFB106AQ8N104 65 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 LRRC43Q8N309 656 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 PAWRQ96IZ0 340 aaKnown RBP20.44■□□□□ 0.86
CLN6-205ENST00000564846 ZCWPW1Q9H0M4 648 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 VIPAS39Q9H9C1 493 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 POPDC2Q9HBU9 364 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLN6-205ENST00000564846 SCN5AQ14524 2016 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 SF3B1O75533 1304 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLN6-205ENST00000564846 MDM4O15151 490 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 GAS8O95995 478 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 SNX1Q13596 522 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 PDK2Q15119 407 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 RAB6CQ53S08 254 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 VARS2Q5ST30 1063 aaKnown RBP20.44■□□□□ 0.86
CLN6-205ENST00000564846 VSIG1Q86XK7 387 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 DDX42Q86XP3 938 aaKnown RBP eCLIP20.44■□□□□ 0.86
CLN6-205ENST00000564846 TTC13Q8NBP0 860 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 SLC2A13Q96QE2 648 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 FRMD8P1Q9BZ68 369 aaPredicted RBP20.44■□□□□ 0.86
CLN6-205ENST00000564846 RAB6CQ9H0N0 254 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 FAM53CQ9NYF3 392 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 STAP1Q9ULZ2 295 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 ZBED1O96006 694 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 CD48P09326 243 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 ECHS1P30084 290 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 ARSEP51690 589 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 LMNB2Q03252 620 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 ELAVL2Q12926 359 aaKnown RBP20.43■□□□□ 0.86
CLN6-205ENST00000564846 PPP1R7Q15435 360 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 DCAF6Q58WW2 860 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 FAM171A1Q5VUB5 890 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 BBS12Q6ZW61 710 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 GPRIN1Q7Z2K8 1008 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 SCML4Q8N228 414 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 IRGQQ8WZA9 623 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 NDRG1Q92597 394 aaKnown RBP20.43■□□□□ 0.86
CLN6-205ENST00000564846 NT5C3BQ969T7 300 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 GDAP1L1Q96MZ0 367 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 RHOBTB2Q9BYZ6 727 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 TRIM31Q9BZY9 425 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 DPH5Q9H2P9 285 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 MARCH5Q9NX47 278 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 OGFRQ9NZT2 677 aa20.43■□□□□ 0.86
CLN6-205ENST00000564846 LIASO43766 372 aa20.42■□□□□ 0.86
CLN6-205ENST00000564846 GALTP07902 379 aa20.42■□□□□ 0.86
CLN6-205ENST00000564846 LBX1P52954 281 aa20.42■□□□□ 0.86
CLN6-205ENST00000564846 CDH6P55285 790 aa20.42■□□□□ 0.86
CLN6-205ENST00000564846 MRPL58Q14197 206 aaKnown RBP20.42■□□□□ 0.86
CLN6-205ENST00000564846 NFE2Q16621 373 aaPredicted RBP20.42■□□□□ 0.86
CLN6-205ENST00000564846 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLN6-205ENST00000564846 CALN1Q9BXU9 219 aa20.42■□□□□ 0.86
CLN6-205ENST00000564846 ACBD3Q9H3P7 528 aa20.42■□□□□ 0.86
CLN6-205ENST00000564846 TFE3P19532 575 aaPredicted RBP20.41■□□□□ 0.86
CLN6-205ENST00000564846 FGFR3P22607 806 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 SULT1E1P49888 294 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 KRT17Q04695 432 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 KRT81Q14533 505 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 LRRC26Q2I0M4 334 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 SLC39A12Q504Y0 691 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 PM20D1Q6GTS8 502 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 FUT10Q6P4F1 479 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 NECAB2Q7Z6G3 386 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 FUBP3Q96I24 572 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLN6-205ENST00000564846 CCDC114Q96M63 670 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 NPY6RQ99463 290 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 SNRNP25Q9BV90 132 aaKnown RBP20.41■□□□□ 0.86
CLN6-205ENST00000564846 MAK16Q9BXY0 300 aaKnown RBP20.41■□□□□ 0.86
CLN6-205ENST00000564846 GPR62Q9BZJ7 368 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 ABHD14A-ACY1A0A1B0GW23 586 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 OR6C75A6NL08 312 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 YJEFN3A6XGL0 299 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 E7ENQ6 273 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 CAPN9O14815 690 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 CST8O60676 142 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 USP17L7P0C7H9 530 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 RABGGTBP53611 331 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 BCAR1P56945 870 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 BYSLQ13895 437 aaKnown RBP20.41■□□□□ 0.86
CLN6-205ENST00000564846 DPYSL3Q14195 570 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 ZNF280DQ6N043 979 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 BNIPLQ7Z465 357 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 CEP57Q86XR8 500 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 RFX6Q8HWS3 928 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 FAM71BQ8TC56 605 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 ADAM33Q9BZ11 813 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 FAM129AQ9BZQ8 928 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 RRN3Q9NYV6 651 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 DRG1Q9Y295 367 aaKnown RBP20.41■□□□□ 0.86
CLN6-205ENST00000564846 SNX24Q9Y343 169 aa20.41■□□□□ 0.86
CLN6-205ENST00000564846 ZNF487B1APH4 448 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 TIMP1P01033 207 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 LTFP02788 710 aa20.4■□□□□ 0.86
CLN6-205ENST00000564846 FAM153BP0C7A2 387 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms