RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GALNT8Q9NY28 637 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 DNAJC16Q9Y2G8 782 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 BUD23O43709 281 aaKnown RBP21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 EXTL3O43909 919 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 KDELR1P24390 212 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 MSLNQ13421 630 aaPredicted RBP21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 DENND1BQ6P3S1 775 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 C15orf39Q6ZRI6 1047 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 PIP4K2CQ8TBX8 421 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 FAM192AQ9GZU8 254 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 APPL1Q9UKG1 709 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 PLLPQ9Y342 182 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 MCF2LO15068 1137 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 PSMC1P62191 440 aaKnown RBP21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 GK3PQ14409 553 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 SPDYAQ5MJ70 313 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 DRICH1Q6PGQ1 229 aaPredicted RBP21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 IYDQ6PHW0 289 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 DHDDSQ86SQ9 333 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 APLFQ8IW19 511 aaPredicted RBP21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 ST6GALNAC4Q9H4F1 302 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 S100A14Q9HCY8 104 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 KCNK4Q9NYG8 393 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 TMOD2Q9NZR1 351 aa21.3■■□□□ 1
MAP1LC3B-206ENST00000564844 TGDSO95455 350 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 CSH1P0DML2 217 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 CSH2P0DML3 217 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 VCLP18206 1134 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 CDH8P55286 799 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 SCYL2Q6P3W7 929 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 SH2D5Q6ZV89 423 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 ABTB1Q969K4 478 aaPredicted RBP21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 C3orf70A6NLC5 250 aaPredicted RBP21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 KCNN4O15554 427 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 EDN1P05305 212 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 RAG1P15918 1043 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 CRABP2P29373 138 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 GRIA1P42261 906 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 STX3Q13277 289 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 GSTA3Q16772 222 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 EML3Q32P44 896 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 EFHC1Q5JVL4 640 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 ARHGEF16Q5VV41 709 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 CHSY1Q86X52 802 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 DEFB107AQ8IZN7 70 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 NAT14Q8WUY8 206 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 PGLYRP2Q96PD5 576 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 SSU72Q9NP77 194 aaKnown RBP21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 CISHQ9NSE2 258 aa21.29■■□□□ 1
MAP1LC3B-206ENST00000564844 VAV1P15498 845 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 PTPN20Q4JDL3 420 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 FBXL19Q6PCT2 694 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 SLC26A11Q86WA9 606 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 MPP5Q8N3R9 675 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 TMEM35BQ8NCS4 154 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 CCDC106Q9BWC9 280 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 IMPG2Q9BZV3 1241 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 PNPOQ9NVS9 261 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 UBIAD1Q9Y5Z9 338 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 TFAMQ00059 246 aaKnown RBP21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 SLC18A2Q05940 514 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 TTC39BQ5VTQ0 682 aaPredicted RBP21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 TRIM72Q6ZMU5 477 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 CLEC4DQ8WXI8 215 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 IFT122Q9HBG6 1241 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 CYTH4Q9UIA0 394 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 SOX13Q9UN79 622 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 HBS1LQ9Y450 684 aaKnown RBP21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 FOCADQ5VW36 1801 aa21.28■■□□□ 1
MAP1LC3B-206ENST00000564844 KRT37O76014 449 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 SNRPAP09012 282 aaKnown RBP21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 CDH6P55285 790 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 TTLL12Q14166 644 aaPredicted RBP21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 PGM5Q15124 567 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 SNRNP27Q8WVK2 155 aaKnown RBP21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 AZIN2Q96A70 460 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 ATXN7L3BQ96GX2 97 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 TBC1D22BQ9NU19 505 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 DDX43Q9NXZ2 648 aaKnown RBP21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 K7ERI5 159 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 TRPA1O75762 1119 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 KRT19P08727 400 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 PIGHQ14442 188 aaPredicted RBP21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 PDK3Q15120 406 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 ATG16L1Q676U5 607 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 CCDC60Q8IWA6 550 aaPredicted RBP21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 VCPIP1Q96JH7 1222 aa21.27■■□□□ 1
MAP1LC3B-206ENST00000564844 F8W8V4 182 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RGL2O15211 777 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CALB1P05937 261 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 STIP1P31948 543 aaKnown RBP21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 HSPA1LP34931 641 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CAP2P40123 477 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PSMD6Q15008 389 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 CASC4Q6P4E1 433 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 RBM44Q6ZP01 1051 aaKnown RBP21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 PDSS2Q86YH6 399 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 FAM172AQ8WUF8 416 aa21.27■□□□□ 0.99
MAP1LC3B-206ENST00000564844 MAGED2Q9UNF1 606 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms