RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 CACNA2D1P54289 1103 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 SF3A1Q15459 793 aaKnown RBP15.48■□□□□ 0.07
VAC14-206ENST00000564685 SURF1Q15526 300 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 COL28A1Q2UY09 1125 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 ANO4Q32M45 955 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 PLEKHG6Q3KR16 790 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 HECTD3Q5T447 861 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 SDE2Q6IQ49 451 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 CCNI2Q6ZMN8 369 aaPredicted RBP15.48■□□□□ 0.07
VAC14-206ENST00000564685 SV2BQ7L1I2 683 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 RGL4Q8IZJ4 473 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 PNPLA1Q8N8W4 532 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 TERB1Q8NA31 727 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
VAC14-206ENST00000564685 MRPL45Q9BRJ2 306 aaKnown RBP15.48■□□□□ 0.07
VAC14-206ENST00000564685 ELOVL4Q9GZR5 314 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 FAM124BQ9H5Z6 455 aaPredicted RBP15.48■□□□□ 0.07
VAC14-206ENST00000564685 CCDC86Q9H6F5 360 aaKnown RBP15.48■□□□□ 0.07
VAC14-206ENST00000564685 SPHK2Q9NRA0 654 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 TMEM30AQ9NV96 361 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 HCN2Q9UL51 889 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 PLXNB3Q9ULL4 1909 aa15.48■□□□□ 0.07
VAC14-206ENST00000564685 ZNF233A6NK53 670 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 NDUFS2O75306 463 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
VAC14-206ENST00000564685 GJB3O75712 270 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 RTN3O95197 1032 aaPredicted RBP15.47■□□□□ 0.07
VAC14-206ENST00000564685 IDEP14735 1019 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 GNSP15586 552 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 PTPN1P18031 435 aaKnown RBP15.47■□□□□ 0.07
VAC14-206ENST00000564685 NDUFV2P19404 249 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 SYCP2LQ5T4T6 812 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 TMEM25Q86YD3 366 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 MIB1Q86YT6 1006 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 NAXDQ8IW45 347 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 BBS7Q8IWZ6 715 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 CHPFQ8IZ52 775 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 NUP93Q8N1F7 819 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 PDZD8Q8NEN9 1154 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 OR6B3Q8NGW1 331 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 IPO4Q8TEX9 1081 aaKnown RBP15.47■□□□□ 0.07
VAC14-206ENST00000564685 FBXO32Q969P5 355 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 ERLEC1Q96DZ1 483 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 ZNF419Q96HQ0 510 aaPredicted RBP15.47■□□□□ 0.07
VAC14-206ENST00000564685 ZNF518BQ9C0D4 1074 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 SUSD2Q9UGT4 822 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 CHORDC1Q9UHD1 332 aaPredicted RBP15.47■□□□□ 0.07
VAC14-206ENST00000564685 STARD13Q9Y3M8 1113 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 NME7Q9Y5B8 376 aa15.47■□□□□ 0.07
VAC14-206ENST00000564685 CLDN5O00501 218 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 KIAA0391O15091 583 aaKnown RBP15.46■□□□□ 0.07
VAC14-206ENST00000564685 TRIM24O15164 1050 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 TACC1O75410 805 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 PRPF6O94906 941 aaKnown RBP15.46■□□□□ 0.07
VAC14-206ENST00000564685 EGFLAMQ63HQ2 1017 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 GRAMD4Q6IC98 578 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 TRAPPC11Q7Z392 1133 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 BRAPQ7Z569 592 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 CBWD2Q8IUF1 395 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 WDR49Q8IV35 697 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 OVCA2Q8WZ82 227 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 ACOX2Q99424 681 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 B3GNT5Q9BYG0 378 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 FGFBP2Q9BYJ0 223 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 DPEP3Q9H4B8 488 aa15.46■□□□□ 0.07
VAC14-206ENST00000564685 APOBEC2Q9Y235 224 aaKnown RBP15.46■□□□□ 0.07
VAC14-206ENST00000564685 HELZ2Q9BYK8 2649 aaKnown RBP15.45■□□□□ 0.06
VAC14-206ENST00000564685 FAM163BP0C2L3 166 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 WDR45BQ5MNZ6 344 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 LARP1BQ659C4 914 aaKnown RBP15.45■□□□□ 0.06
VAC14-206ENST00000564685 B3GALNT2Q8NCR0 500 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 MDM1Q8TC05 714 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 FOXJ1Q92949 421 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 TMX3Q96JJ7 454 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 DUSP9Q99956 384 aaKnown RBP15.45■□□□□ 0.06
VAC14-206ENST00000564685 NACA2Q9H009 215 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 CCSER2Q9H7U1 834 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 CD248Q9HCU0 757 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 PANK4Q9NVE7 773 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 DNAJC17Q9NVM6 304 aaKnown RBP15.45■□□□□ 0.06
VAC14-206ENST00000564685 CABIN1Q9Y6J0 2220 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 PTPRBP23467 1997 aa15.45■□□□□ 0.06
VAC14-206ENST00000564685 FRMD3A2A2Y4 597 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 A8MXQ7 604 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 IRF1P10914 325 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 MAOBP27338 520 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 TXLNAP40222 546 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 TUBP50607 506 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 TNNC1P63316 161 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 GRIK2Q13002 908 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 WDR72Q3MJ13 1102 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 SNX30Q5VWJ9 437 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 SLCO6A1Q86UG4 719 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 SCAMP5Q8TAC9 235 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 SCFD1Q8WVM8 642 aa15.44■□□□□ 0.06
VAC14-206ENST00000564685 HNRNPLLQ8WVV9 542 aaKnown RBP15.44■□□□□ 0.06
VAC14-206ENST00000564685 WBP2Q969T9 261 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms