RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZNF516Q92618 1163 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 KCNK16Q96T55 309 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 DMAP1Q9NPF5 467 aaPredicted RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 SPHK2Q9NRA0 654 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 CGNQ9P2M7 1197 aaKnown RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 NXF1Q9UBU9 619 aaKnown RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 CHORDC1Q9UHD1 332 aaPredicted RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 RALYQ9UKM9 306 aaKnown RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 STARD13Q9Y3M8 1113 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 NEUROG3Q9Y4Z2 214 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 IGF2RP11717 2491 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 ZZEF1O43149 2961 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 MYOFQ9NZM1 2061 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 ITPKAP23677 461 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 CYP2J2P51589 502 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 SLC5A3P53794 718 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 EHHADHQ08426 723 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 SEMA3BQ13214 749 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 STK38Q15208 465 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 DUOXA1Q1HG43 343 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 RABEPKQ7Z6M1 372 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 FAM35AQ86V20 835 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 BBS7Q8IWZ6 715 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 C12orf56Q8IXR9 622 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 TERB1Q8NA31 727 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 IQUBQ8NA54 791 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 LINC00301Q8NCQ3 95 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 SCAMP5Q8TAC9 235 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 SMARCD1Q96GM5 515 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
NME3-204ENST00000563498 TNIP3Q96KP6 325 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 C7orf25Q9BPX7 421 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 CCSER2Q9H7U1 834 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 ZDHHC4Q9NPG8 344 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 SLC6A14Q9UN76 642 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 MTMR6Q9Y217 621 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 ASCC3Q8N3C0 2202 aaKnown RBP19.8■□□□□ 0.76
NME3-204ENST00000563498 ASPMQ8IZT6 3477 aa19.8■□□□□ 0.76
NME3-204ENST00000563498 CLIC2O15247 247 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 PPP6R2O75170 966 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 SERPINF2P08697 491 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 GABRG2P18507 467 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 AP3M2P53677 418 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 RPL6Q02878 288 aaKnown RBP19.79■□□□□ 0.76
NME3-204ENST00000563498 BMT2Q1RMZ1 405 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 C10orf76Q5T2E6 689 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 PAQR9Q6ZVX9 377 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 NAT16Q8N8M0 369 aa19.79■□□□□ 0.76
NME3-204ENST00000563498 ATXN2Q99700 1313 aaKnown RBP19.78■□□□□ 0.76
NME3-204ENST00000563498 PHACTR2O75167 634 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 CFIP05156 583 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 HOXB2P14652 356 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 NTSR1P30989 418 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 ATXN3P54252 364 aaPredicted RBP19.78■□□□□ 0.76
NME3-204ENST00000563498 GFPT1Q06210 699 aaPredicted RBP19.78■□□□□ 0.76
NME3-204ENST00000563498 ANO4Q32M45 955 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 UNC13DQ70J99 1090 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 TMEM25Q86YD3 366 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 NELFCDQ8IXH7 590 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 DHX58Q96C10 678 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 SMYD3Q9H7B4 428 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 MAGEF1Q9HAY2 307 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 CAPN10Q9HC96 672 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 CALCOCO1Q9P1Z2 691 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 HCN2Q9UL51 889 aa19.78■□□□□ 0.76
NME3-204ENST00000563498 A0A1W2PQF6 199 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 SPTLC2O15270 562 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 ZNF217O75362 1048 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 CDH8P55286 799 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 CLDN10P78369 228 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 ZNF699Q32M78 642 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 ZNF667Q5HYK9 610 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 HTR3DQ70Z44 454 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 FUKQ8N0W3 1084 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 HDDC3Q8N4P3 179 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 MED10Q9BTT4 135 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 NACA2Q9H009 215 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 KRT82Q9NSB4 513 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 GMIPQ9P107 970 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 MSRB2Q9Y3D2 182 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 SPEGQ15772 3267 aa19.77■□□□□ 0.76
NME3-204ENST00000563498 PI4KAP42356 2102 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 H0Y626 953 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 ZBTB24O43167 697 aaPredicted RBP19.76■□□□□ 0.75
NME3-204ENST00000563498 EXOC3O60645 756 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 TRIM16O95361 564 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 SIM1P81133 766 aaPredicted RBP19.76■□□□□ 0.75
NME3-204ENST00000563498 ZNF33AQ06730 810 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 GRAMD4Q6IC98 578 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 SDE2Q6IQ49 451 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 KIAA1211LQ6NV74 962 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 MIB1Q86YT6 1006 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 FBXO44Q9H4M3 255 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 CSNK1G1Q9HCP0 422 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 CD248Q9HCU0 757 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 MARK1Q9P0L2 795 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 TFIP11Q9UBB9 837 aaKnown RBP19.76■□□□□ 0.75
NME3-204ENST00000563498 AKAP13Q12802 2813 aa19.76■□□□□ 0.75
NME3-204ENST00000563498 MYO18AQ92614 2054 aaKnown RBP19.75■□□□□ 0.75
NME3-204ENST00000563498 PCDH15Q96QU1 1955 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms