RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 NKD2Q969F2 451 aaPredicted RBP9.96□□□□□ -0.82
CDH13-205ENST00000562307 FUBP3Q96I24 572 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDH13-205ENST00000562307 PAWRQ96IZ0 340 aaKnown RBP9.96□□□□□ -0.82
CDH13-205ENST00000562307 NPY6RQ99463 290 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 OXCT2Q9BYC2 517 aaPredicted RBP9.96□□□□□ -0.82
CDH13-205ENST00000562307 ULBP1Q9BZM6 244 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 FAM129AQ9BZQ8 928 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 VIPAS39Q9H9C1 493 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 POPDC2Q9HBU9 364 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 DMAP1Q9NPF5 467 aaPredicted RBP9.96□□□□□ -0.82
CDH13-205ENST00000562307 CHST7Q9NS84 486 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 KLHL11Q9NVR0 708 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 MARCH5Q9NX47 278 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 PCSK1NQ9UHG2 260 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 NFU1Q9UMS0 254 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 FAN1Q9Y2M0 1017 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 PRG3Q9Y2Y8 225 aaPredicted RBP9.96□□□□□ -0.82
CDH13-205ENST00000562307 NEU2Q9Y3R4 380 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 USP3Q9Y6I4 520 aa9.96□□□□□ -0.82
CDH13-205ENST00000562307 TTC3P53804 2025 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 TBKBP1A7MCY6 615 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 TNFRSF10BO14763 440 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 DAPK3O43293 454 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 LIASO43766 372 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 DGKIO75912 1065 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 ECEL1O95672 775 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 ZBED1O96006 694 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 TIMP1P01033 207 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 TFE3P19532 575 aaPredicted RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 IL4RP24394 825 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 MAGEA11P43364 429 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 KCNJ1P48048 391 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 CTCFP49711 727 aaPredicted RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 LBX1P52954 281 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 LMNB2Q03252 620 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 PTK6Q13882 451 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 CASP8Q14790 479 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 LLGL1Q15334 1064 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 NFE2Q16621 373 aaPredicted RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 SMTNL2Q2TAL5 461 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 KCNT1Q5JUK3 1230 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 ERMARDQ5T6L9 678 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.95□□□□□ -0.82
CDH13-205ENST00000562307 GPRIN1Q7Z2K8 1008 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 NECAB2Q7Z6G3 386 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 DEFB128Q7Z7B8 93 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 PSTKQ8IV42 348 aaKnown RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 MAP7D3Q8IWC1 876 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 GSPT2Q8IYD1 628 aaKnown RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 LRRC43Q8N309 656 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 TTC13Q8NBP0 860 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 IFT81Q8WYA0 676 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 ACSF2Q96CM8 615 aaPredicted RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 PGAP3Q96FM1 320 aaPredicted RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 SLC9A7Q96T83 725 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 TRIM51Q9BSJ1 452 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 GPR62Q9BZJ7 368 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 PLEKHA4Q9H4M7 779 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 NGRNQ9NPE2 291 aaKnown RBP9.95□□□□□ -0.82
CDH13-205ENST00000562307 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 OGFRQ9NZT2 677 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 CEP350Q5VT06 3117 aa9.95□□□□□ -0.82
CDH13-205ENST00000562307 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 SF3B1O75533 1304 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDH13-205ENST00000562307 YJEFN3A6XGL0 299 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 E7ENQ6 273 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 H7C4K7 107 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 EFCAB14O75071 495 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 LTFP02788 710 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 CD48P09326 243 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 FAM153BP0C7A2 387 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 L1CAMP32004 1257 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 SMARCB1Q12824 385 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 TFDP2Q14188 446 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 DPYSL3Q14195 570 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 OASLQ15646 514 aaKnown RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 DPYSL2Q16555 572 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 CDO1Q16878 200 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 FAM153CQ494X1 144 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 ZFYVE27Q5T4F4 411 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 FAM171A1Q5VUB5 890 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 OTUD1Q5VV17 481 aaPredicted RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 SYPL2Q5VXT5 272 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 KAZNQ674X7 775 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 FUT10Q6P4F1 479 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 VSTM1Q6UX27 236 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 HFE2Q6ZVN8 426 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 SND1Q7KZF4 910 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDH13-205ENST00000562307 DDX42Q86XP3 938 aaKnown RBP eCLIP9.94□□□□□ -0.82
CDH13-205ENST00000562307 RNF168Q8IYW5 571 aaPredicted RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 SLC35B2Q8TB61 432 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 ATG4AQ8WYN0 398 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 NDRG1Q92597 394 aaKnown RBP9.94□□□□□ -0.82
CDH13-205ENST00000562307 HSPH1Q92598 858 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 TOP1MTQ969P6 601 aa9.94□□□□□ -0.82
CDH13-205ENST00000562307 FAM149B1Q96BN6 582 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms