RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PRKCQQ04759 706 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 FCHO2Q0JRZ9 810 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 EFEMP1Q12805 493 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 RUNX3Q13761 415 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 GSE1Q14687 1217 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 PON2Q15165 354 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 ITPRIPL2Q3MIP1 535 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 MIIPQ5JXC2 388 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 BTBD8Q5XKL5 378 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 ENOSF1Q7L5Y1 443 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 UBR7Q8N806 425 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 RIN3Q8TB24 985 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 EDEM1Q92611 657 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 NMUR1Q9HB89 426 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 SPATA6Q9NWH7 488 aaPredicted RBP10.65□□□□□ -0.7
HERC1-212ENST00000561348 COMMD8Q9NX08 183 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 OBP2AQ9NY56 170 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 AJAP1Q9UKB5 411 aaPredicted RBP10.65□□□□□ -0.7
HERC1-212ENST00000561348 ARHGAP26Q9UNA1 814 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 SCML2Q9UQR0 700 aa10.65□□□□□ -0.7
HERC1-212ENST00000561348 KIF26AQ9ULI4 1882 aaPredicted RBP10.65□□□□□ -0.7
HERC1-212ENST00000561348 GTPBP10A4D1E9 387 aaKnown RBP10.64□□□□□ -0.71
HERC1-212ENST00000561348 SMTNL1A8MU46 457 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 SPECC1L-ADORA2AF8WAN1 911 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 H0Y858 1186 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 FOXN3O00409 490 aaPredicted RBP10.64□□□□□ -0.71
HERC1-212ENST00000561348 MAN2B1O00754 1011 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 NCAM2O15394 837 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 ZBED1O96006 694 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 OAS1P00973 400 aaKnown RBP10.64□□□□□ -0.71
HERC1-212ENST00000561348 SETSIPP0DME0 302 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 ATP1A3P13637 1013 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 TARSP26639 723 aaKnown RBP10.64□□□□□ -0.71
HERC1-212ENST00000561348 WEE1P30291 646 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 STARD6P59095 220 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 YWHAGP61981 247 aaKnown RBP eCLIP10.64□□□□□ -0.71
HERC1-212ENST00000561348 PTK2Q05397 1052 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 GOLGA8FQ08AF8 430 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 GOLGA8DPQ0D2H9 430 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 KCNMA1Q12791 1236 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 NR1H3Q13133 447 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 DRAP1Q14919 205 aaPredicted RBP10.64□□□□□ -0.71
HERC1-212ENST00000561348 PDGFRLQ15198 375 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 ZNF77Q15935 545 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 CNGA2Q16280 664 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 TAF3Q5VWG9 929 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 DENND1BQ6P3S1 775 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 LCLAT1Q6UWP7 414 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 CPA6Q8N4T0 437 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 PJA1Q8NG27 643 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 RNF139Q8WU17 664 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 OVCA2Q8WZ82 227 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 GOLGA1Q92805 767 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 BHMTQ93088 406 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 FAM81BQ96LP2 452 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 ZSWIM1Q9BR11 485 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 FAM124BQ9H5Z6 455 aaPredicted RBP10.64□□□□□ -0.71
HERC1-212ENST00000561348 LMAN1LQ9HAT1 526 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 LTB4R2Q9NPC1 389 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 SIX2Q9NPC8 291 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 NLRC4Q9NPP4 1024 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 PLCB1Q9NQ66 1216 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 FAM86C1Q9NVL1 165 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 OSER1Q9NX31 292 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.64□□□□□ -0.71
HERC1-212ENST00000561348 FHOD1Q9Y613 1164 aa10.64□□□□□ -0.71
HERC1-212ENST00000561348 SOBPA7XYQ1 873 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 CTHP32929 405 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 KRT9P35527 623 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 POLR2FP61218 127 aaKnown RBP10.63□□□□□ -0.71
HERC1-212ENST00000561348 TPM4P67936 248 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 SLC7A9P82251 487 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ZXDBP98169 803 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ARID5AQ03989 594 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ZNF268Q14587 947 aaPredicted RBP10.63□□□□□ -0.71
HERC1-212ENST00000561348 SYCP1Q15431 976 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 STILQ15468 1287 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ANO4Q32M45 955 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 KLHDC7AQ5VTJ3 777 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 CDKAL1Q5VV42 579 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 PMF1Q6P1K2 205 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 SCD5Q86SK9 330 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 TADA2BQ86TJ2 420 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 SCUBE3Q8IX30 993 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ARHGAP18Q8N392 663 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 NAT16Q8N8M0 369 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 DTWD2Q8NBA8 298 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 NEK11Q8NG66 645 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 OSCP1Q8WVF1 389 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ZNF606Q8WXB4 792 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 ATOH1Q92858 354 aaPredicted RBP10.63□□□□□ -0.71
HERC1-212ENST00000561348 ATP2A3Q93084 1043 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 FAM149B1Q96BN6 582 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 NELL2Q99435 816 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 FAM83CQ9BQN1 747 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 SYNCQ9H7C4 482 aa10.63□□□□□ -0.71
HERC1-212ENST00000561348 C8orf33Q9H7E9 229 aaPredicted RBP10.63□□□□□ -0.71
HERC1-212ENST00000561348 ECT2Q9H8V3 914 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms