RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SSH1Q8WYL5 1049 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 TBC1D5Q92609 795 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 EAF2Q96CJ1 260 aaPredicted RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 TAAR1Q96RJ0 339 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 BTBD2Q9BX70 525 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 CCDC8Q9H0W5 538 aaPredicted RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 WDR6Q9NNW5 1121 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 RIC8BQ9NVN3 520 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 COL20A1Q9P218 1284 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 ING1Q9UK53 422 aaPredicted RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 NEUROG3Q9Y4Z2 214 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 PCDHA8Q9Y5H6 950 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 FOCADQ5VW36 1801 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 ZBED9Q6R2W3 1325 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 COL12A1Q99715 3063 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 OVOL3O00110 214 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 MGEA5O60502 916 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 EIF3JO75822 258 aaKnown RBP4.35□□□□□ -1.71
HERC1-211ENST00000560983 LAMP2P13473 410 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 ACO1P21399 889 aaKnown RBP4.35□□□□□ -1.71
HERC1-211ENST00000560983 MC4RP32245 332 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 PBX3P40426 434 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 MAGEA9P43362 315 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 RPS9P46781 194 aaKnown RBP4.35□□□□□ -1.71
HERC1-211ENST00000560983 FAM189BP81408 668 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 HGFACQ04756 655 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 HTR4Q13639 388 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 UBXN2BQ14CS0 331 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 STXBP2Q15833 593 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 ZNF568Q3ZCX4 644 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 TRIM61Q5EBN2 209 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 ZBTB41Q5SVQ8 909 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 BTNL9Q6UXG8 535 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 C15orf39Q6ZRI6 1047 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 TSHZ1Q6ZSZ6 1077 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 MTDHQ86UE4 582 aaKnown RBP4.35□□□□□ -1.71
HERC1-211ENST00000560983 GSTCDQ8NEC7 633 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 LMBR1Q8WVP7 490 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 AUTS2Q8WXX7 1259 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 GLG1Q92896 1179 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 LRIG1Q96JA1 1093 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 SPATA33Q96N06 139 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 KLHL5Q96PQ7 755 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 MPHOSPH6Q99547 160 aaKnown RBP4.35□□□□□ -1.71
HERC1-211ENST00000560983 DPYSL5Q9BPU6 564 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 FTHL17Q9BXU8 183 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 TRIM55Q9BYV6 548 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 ARRDC1-AS1Q9H2J1 176 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 LTB4R2Q9NPC1 389 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 ARHGAP28Q9P2N2 729 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 KLK13Q9UKR3 277 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 PADI3Q9ULW8 664 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 HDAC5Q9UQL6 1122 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 PCDHB7Q9Y5E2 793 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 HS3ST3A1Q9Y663 406 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 CDY2AQ9Y6F7 541 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 NUMBLQ9Y6R0 609 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 NRCAMQ92823 1304 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 ZNF462Q96JM2 2506 aa4.35□□□□□ -1.71
HERC1-211ENST00000560983 PTPN13Q12923 2485 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 B4DLN1 442 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 NPIPB8E9PQR5 432 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 PRDM1O75626 825 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 MBD4O95243 580 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 LGALS2P05162 132 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 CEACAM1P13688 526 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 LAG3P18627 525 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SDHAP31040 664 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 HOXC13P31276 330 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SLC16A2P36021 539 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 MRPL12P52815 198 aaKnown RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 KRT17Q04695 432 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 IKQ13123 557 aaPredicted RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 SERINC3Q13530 473 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 NOLC1Q14978 699 aaKnown RBP eCLIP4.34□□□□□ -1.71
HERC1-211ENST00000560983 MLF2Q15773 248 aaPredicted RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 WDR72Q3MJ13 1102 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SBK1Q52WX2 424 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 USP39Q53GS9 565 aaKnown RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 TM4SF20Q53R12 229 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 MARCH8Q5T0T0 291 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SYDE2Q5VT97 1194 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 FSTL4Q6MZW2 842 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 USP30Q70CQ3 517 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 CKAP2LQ8IYA6 745 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 SLC39A11Q8N1S5 342 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 ZNF843Q8N446 348 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 CMASQ8NFW8 434 aaPredicted RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 CACTINQ8WUQ7 758 aaKnown RBP4.34□□□□□ -1.71
HERC1-211ENST00000560983 DNAJB3Q8WWF6 145 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 DLG3Q92796 817 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 FGF14Q92915 247 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 EXTL1Q92935 676 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 CASD1Q96PB1 797 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 IWS1Q96ST2 819 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 NELL2Q99435 816 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 DHRS4Q9BTZ2 278 aa4.34□□□□□ -1.71
HERC1-211ENST00000560983 RHOBTB2Q9BYZ6 727 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms