RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 AMHR2Q16671 573 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 ATP6AP1LQ52LC2 224 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
SYNM-203ENST00000560674 TMC2Q8TDI7 906 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 DRG1Q9Y295 367 aaKnown RBP13.05□□□□□ -0.32
SYNM-203ENST00000560674 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
SYNM-203ENST00000560674 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 ATP9AO75110 1047 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 AP1G2O75843 785 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 F9P00740 461 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
SYNM-203ENST00000560674 RAET1EQ8TD07 263 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 RPRD1AQ96P16 312 aaPredicted RBP13.05□□□□□ -0.32
SYNM-203ENST00000560674 NCKIPSDQ9NZQ3 722 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 USP18Q9UMW8 372 aa13.05□□□□□ -0.32
SYNM-203ENST00000560674 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
SYNM-203ENST00000560674 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 ATP6V1B2P21281 511 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 SLC11A2P49281 568 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ANXA11P50995 505 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 DDX39BQ13838 428 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 TAF1CQ15572 869 aaPredicted RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 KHDRBS2Q5VWX1 349 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ANKRD27Q96NW4 1050 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ABI2Q9NYB9 513 aaPredicted RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 LMTK2Q8IWU2 1503 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 MAP3K13O43283 966 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ALDH1A3P47895 512 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 CDH18Q13634 790 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ZBTB49Q6ZSB9 765 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ACOT9Q9Y305 439 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 NCOA3Q9Y6Q9 1424 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 EPB42P16452 691 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ACO1P21399 889 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 ALDH6A1Q02252 535 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 RINLQ6ZS11 566 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 CACNA2D2Q9NY47 1150 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 TMCC3Q9ULS5 477 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 NAALADL1Q9UQQ1 740 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 SAC3D1A6NKF1 404 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 CHI3L1P36222 383 aaPredicted RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 NPTX2P47972 431 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 PPP4CP60510 307 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 RPL10AP62906 217 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 WASHC2DQ5SRD0 308 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 SLC20A1Q8WUM9 679 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 FUCA2Q9BTY2 467 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 OSBPL10Q9BXB5 764 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 NDEL1Q9GZM8 345 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 KRCC1Q9NPI7 259 aaPredicted RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 KRT84Q9NSB2 600 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 ABCA9Q8IUA7 1624 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 CENPAP49450 140 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 SLC47A2Q86VL8 602 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 KRT78Q8N1N4 520 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 MYO1HQ8N1T3 1032 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 CCDC33Q8N5R6 958 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 NMD3Q96D46 503 aaKnown RBP13.04□□□□□ -0.32
SYNM-203ENST00000560674 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 RAD54BQ9Y620 910 aa13.04□□□□□ -0.32
SYNM-203ENST00000560674 RIPK2O43353 540 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 CDC16Q13042 620 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 SH3GL1Q99961 368 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 UPP2O95045 317 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 PSMA3P25788 255 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 SREBF1P36956 1147 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 MPP3Q13368 585 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 MRPS26Q9BYN8 205 aaKnown RBP13.03□□□□□ -0.32
SYNM-203ENST00000560674 F5H5T6 163 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 BCAT1P54687 386 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 ARMCX4Q5H9R4 360 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 GLRA4Q5JXX5 417 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 HDDC2Q7Z4H3 204 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 MIER2Q8N344 545 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 TMEM39BQ9GZU3 492 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 PCDH9Q9HC56 1237 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 KLK14Q9P0G3 267 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 BMPR2Q13873 1038 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
SYNM-203ENST00000560674 PLEKHA7Q6IQ23 1121 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 TAF2Q6P1X5 1199 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 DEFB107AQ8IZN7 70 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
SYNM-203ENST00000560674 SMNDC1O75940 238 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms