RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 ACTRT1Q8TDG2 376 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 FAM172AQ8WUF8 416 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 KCTD13Q8WZ19 329 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 HSPH1Q92598 858 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 HSFY1Q96LI6 401 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 ZBED2Q9BTP6 218 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 C11orf84Q9BUA3 381 aaPredicted RBP7.79□□□□□ -1.16
IDH3A-220ENST00000560667 PARD6BQ9BYG5 372 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 CERS4Q9HA82 394 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SNX10Q9Y5X0 201 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SF3B1O75533 1304 aaKnown RBP eCLIP7.79□□□□□ -1.16
IDH3A-220ENST00000560667 LTBP2Q14767 1821 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 MTMR11A4FU01 709 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 EFCAB8A8MWE9 144 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 KRIT1O00522 736 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 HOXA2O43364 376 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 MAP3K6O95382 1288 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 ZBED1O96006 694 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 GLI1P08151 1106 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SETSIPP0DME0 302 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 MYBL2P10244 700 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 CPB1P15086 417 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 CTNNA2P26232 953 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 GGCXP38435 758 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SLC5A3P53794 718 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 NRLP54845 237 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 RWDD2BP57060 319 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 DAOAP59103 153 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 TSPY1Q01534 308 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 ROR1Q01973 937 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 NME3Q13232 169 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SHHQ15465 462 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 CCDC181Q5TID7 509 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 RASIP1Q5U651 963 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 FAM131BQ86XD5 332 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 DDX42Q86XP3 938 aaKnown RBP eCLIP7.79□□□□□ -1.16
IDH3A-220ENST00000560667 GSPT2Q8IYD1 628 aaKnown RBP7.79□□□□□ -1.16
IDH3A-220ENST00000560667 VPS52Q8N1B4 723 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 CEP112Q8N8E3 955 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 IPO4Q8TEX9 1081 aaKnown RBP7.79□□□□□ -1.16
IDH3A-220ENST00000560667 UBXN4Q92575 508 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 HAUS1Q96CS2 278 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SMARCD1Q96GM5 515 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 PBKQ96KB5 322 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 TMEM175Q9BSA9 504 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 C17orf80Q9BSJ5 609 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 MRPL9Q9BYD2 267 aaKnown RBP7.79□□□□□ -1.16
IDH3A-220ENST00000560667 WDR35Q9P2L0 1181 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 SFMBT1Q9UHJ3 866 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 AMACRQ9UHK6 382 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 DSEQ9UL01 958 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 USP18Q9UMW8 372 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 MYO9BQ13459 2157 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 DOCK6Q96HP0 2047 aa7.79□□□□□ -1.16
IDH3A-220ENST00000560667 CCDC66A2RUB6 948 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 FAM72CH0Y354 149 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SYN3O14994 580 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 MDM4O15151 490 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 NCAM1P13591 858 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 ATF6P18850 670 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 PBX2P40425 430 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SLC1A1P43005 524 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 TERF1P54274 439 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 GSCP56915 257 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 DYNLT1P63172 113 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 HTRA4P83105 476 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 GPR17Q13304 367 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 PIGHQ14442 188 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 USP41Q3LFD5 358 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 MGAT5BQ3V5L5 792 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 ZFYVE27Q5T4F4 411 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 FAM72AQ5TYM5 149 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 BSPRYQ5W0U4 402 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 FAM72DQ6L9T8 149 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SLC26A9Q7LBE3 791 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 FAM72BQ86X60 149 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SLC13A5Q86YT5 568 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 CCDC50Q8IVM0 306 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 HERC6Q8IVU3 1022 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 RHOT1Q8IXI2 618 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 NIPA2Q8N8Q9 360 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 CENPIQ92674 756 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 LRCH3Q96II8 777 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 GDAP1L1Q96MZ0 367 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SEPT5Q99719 369 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 CNPY3Q9BT09 278 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 DDX23Q9BUQ8 820 aaKnown RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 CARD9Q9H257 536 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 PIGVQ9NUD9 493 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 MFHAS1Q9Y4C4 1052 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 USP3Q9Y6I4 520 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 HIDE1A8MVS5 230 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 M0QYT0 321 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SOX1O00570 391 aaPredicted RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 SART1O43290 800 aaKnown RBP7.78□□□□□ -1.16
IDH3A-220ENST00000560667 RAD51CO43502 376 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 FGF18O76093 207 aa7.78□□□□□ -1.16
IDH3A-220ENST00000560667 ZRANB2O95218 330 aaKnown RBP eCLIP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms