RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 DRICH1Q6PGQ1 229 aaPredicted RBP23.53■■□□□ 1.36
PBX1-218ENST00000560469 SPATA2LQ8IUW3 424 aaPredicted RBP23.53■■□□□ 1.36
PBX1-218ENST00000560469 MAP7D3Q8IWC1 876 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 DEFB106AQ8N104 65 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 ATG4AQ8WYN0 398 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 FRMD8P1Q9BZ68 369 aaPredicted RBP23.53■■□□□ 1.36
PBX1-218ENST00000560469 ULBP1Q9BZM6 244 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 DPH5Q9H2P9 285 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 ACBD3Q9H3P7 528 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 OGFRQ9NZT2 677 aa23.53■■□□□ 1.36
PBX1-218ENST00000560469 MDM4O15151 490 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 GAS8O95995 478 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 ADCY2Q08462 1091 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 ELAVL2Q12926 359 aaKnown RBP23.52■■□□□ 1.36
PBX1-218ENST00000560469 SLC25A52Q3SY17 297 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 VSIG1Q86XK7 387 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 DDX42Q86XP3 938 aaKnown RBP eCLIP23.52■■□□□ 1.36
PBX1-218ENST00000560469 SCML4Q8N228 414 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 TTC13Q8NBP0 860 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 SLC2A13Q96QE2 648 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 ZCWPW1Q9H0M4 648 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 POPDC2Q9HBU9 364 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.52■■□□□ 1.36
PBX1-218ENST00000560469 TMEM30AQ9NV96 361 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 STAP1Q9ULZ2 295 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 MICAL3Q7RTP6 2002 aa23.52■■□□□ 1.36
PBX1-218ENST00000560469 SLC11A1P49279 550 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 ARSEP51690 589 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 CDH6P55285 790 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 PPP1R7Q15435 360 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 RAB6CQ53S08 254 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 BBS12Q6ZW61 710 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 LRRC43Q8N309 656 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 IRGQQ8WZA9 623 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 RAB6CQ9H0N0 254 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 ZBED1O96006 694 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 ECHS1P30084 290 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 CDR1P51861 262 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 VARS2Q5ST30 1063 aaKnown RBP23.51■■□□□ 1.35
PBX1-218ENST00000560469 NDRG1Q92597 394 aaKnown RBP23.51■■□□□ 1.35
PBX1-218ENST00000560469 NT5C3BQ969T7 300 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 PAWRQ96IZ0 340 aaKnown RBP23.51■■□□□ 1.35
PBX1-218ENST00000560469 RHOBTB2Q9BYZ6 727 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 TRIM31Q9BZY9 425 aa23.51■■□□□ 1.35
PBX1-218ENST00000560469 SF3B1O75533 1304 aaKnown RBP eCLIP23.51■■□□□ 1.35
PBX1-218ENST00000560469 NLRC5Q86WI3 1866 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 CEP350Q5VT06 3117 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 FNDC1Q4ZHG4 1894 aaPredicted RBP23.5■■□□□ 1.35
PBX1-218ENST00000560469 PTPRDP23468 1912 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 LIASO43766 372 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 SULT1E1P49888 294 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 KRT17Q04695 432 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 KRT81Q14533 505 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 NFE2Q16621 373 aaPredicted RBP23.5■■□□□ 1.35
PBX1-218ENST00000560469 DCAF6Q58WW2 860 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 ERMARDQ5T6L9 678 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 GPRIN1Q7Z2K8 1008 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 CCDC114Q96M63 670 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 GDAP1L1Q96MZ0 367 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 SNRNP25Q9BV90 132 aaKnown RBP23.5■■□□□ 1.35
PBX1-218ENST00000560469 CALN1Q9BXU9 219 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 MAK16Q9BXY0 300 aaKnown RBP23.5■■□□□ 1.35
PBX1-218ENST00000560469 FAM129AQ9BZQ8 928 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 MARCH5Q9NX47 278 aa23.5■■□□□ 1.35
PBX1-218ENST00000560469 DRG1Q9Y295 367 aaKnown RBP23.5■■□□□ 1.35
PBX1-218ENST00000560469 OR6C75A6NL08 312 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 ZNF487B1APH4 448 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 RRP9O43818 475 aaKnown RBP23.49■■□□□ 1.35
PBX1-218ENST00000560469 CST8O60676 142 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 GALTP07902 379 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 CD48P09326 243 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 TFE3P19532 575 aaPredicted RBP23.49■■□□□ 1.35
PBX1-218ENST00000560469 FGFR3P22607 806 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 PTK6Q13882 451 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 BYSLQ13895 437 aaKnown RBP23.49■■□□□ 1.35
PBX1-218ENST00000560469 TFDP2Q14188 446 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 MRPL58Q14197 206 aaKnown RBP23.49■■□□□ 1.35
PBX1-218ENST00000560469 SLC39A12Q504Y0 691 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 FAM171A1Q5VUB5 890 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 PM20D1Q6GTS8 502 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 RFX6Q8HWS3 928 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 FUBP3Q96I24 572 aaKnown RBP eCLIP23.49■■□□□ 1.35
PBX1-218ENST00000560469 NPY6RQ99463 290 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 RRN3Q9NYV6 651 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 SNX24Q9Y343 169 aa23.49■■□□□ 1.35
PBX1-218ENST00000560469 FAM153BP0C7A2 387 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 USP17L7P0C7H9 530 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 BCAR1P56945 870 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 GPS2Q13227 327 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 DPYSL3Q14195 570 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 LRRC26Q2I0M4 334 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 FAM153CQ494X1 144 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 ZNF280DQ6N043 979 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 FUT10Q6P4F1 479 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.48■■□□□ 1.35
PBX1-218ENST00000560469 BNIPLQ7Z465 357 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 MREGQ8N565 214 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 FAM71BQ8TC56 605 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 FAM153AQ9UHL3 310 aa23.48■■□□□ 1.35
PBX1-218ENST00000560469 YJEFN3A6XGL0 299 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms