RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LRP3O75074 770 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 AFPP02771 609 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 YWHAEP62258 255 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 ZXDBP98169 803 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 LMNB2Q03252 620 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 IRF2BP1Q8IU81 584 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 EHBP1Q8NDI1 1231 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 ATP2A3Q93084 1043 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 CHFRQ96EP1 664 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 DUSP16Q9BY84 665 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 UBXN6Q9BZV1 441 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 EBF3Q9H4W6 596 aa16.03■□□□□ 0.16
SNRPA1-210ENST00000560383 CCDC163A0A0D9SF12 145 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 OTOL1A6NHN0 477 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 ACO1P21399 889 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 ERCC5P28715 1186 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 KIF11P52732 1056 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 ARHGAP8P85298 464 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 GCNT1Q02742 428 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 IFRD2Q12894 506 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 DPCR1Q3MIW9 517 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 FBXO43Q4G163 708 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 CT47A1Q5JQC4 288 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 TRIM68Q6AZZ1 485 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 RBM43Q6ZSC3 357 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 GPRIN1Q7Z2K8 1008 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 DGLUCYQ7Z3D6 616 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 WDR5BQ86VZ2 330 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 CPA6Q8N4T0 437 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 GPT2Q8TD30 523 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 SH3RF2Q8TEC5 729 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 OSCP1Q8WVF1 389 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 GMIPQ9P107 970 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 CHORDC1Q9UHD1 332 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 KIAA1257Q9ULG3 409 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 SCML2Q9UQR0 700 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 USP3Q9Y6I4 520 aa16.02■□□□□ 0.16
SNRPA1-210ENST00000560383 MYO16Q9Y6X6 1858 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 CHURC1-FNTBB4DL54 471 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 LEFTY2O00292 366 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 ATG13O75143 517 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 RETP07949 1114 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 ARSAP15289 507 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 DRD1P21728 446 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 TGM1P22735 817 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 FNTBP49356 437 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 LRMPQ12912 555 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 EML3Q32P44 896 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 HECTD3Q5T447 861 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 FSTL4Q6MZW2 842 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 ANKRD52Q8NB46 1076 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 ZFRQ96KR1 1074 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 CNOT6LQ96LI5 555 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 ECT2Q9H8V3 914 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 CYLDQ9NQC7 956 aa16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 DUS2Q9NX74 493 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-210ENST00000560383 COCHO43405 550 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 ABL1P00519 1130 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 PAEPP09466 180 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 GJA4P35212 333 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 IFNAR2P48551 515 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 PGFP49763 221 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 DMWDQ09019 674 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 SIM2Q14190 667 aaPredicted RBP16■□□□□ 0.15
SNRPA1-210ENST00000560383 RSPO4Q2I0M5 234 aaPredicted RBP16■□□□□ 0.15
SNRPA1-210ENST00000560383 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 PPM1KQ8N3J5 372 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 ZNF276Q8N554 614 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 P2RY13Q9BPV8 354 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 THAP9Q9H5L6 903 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 TLR8Q9NR97 1041 aaKnown RBP16■□□□□ 0.15
SNRPA1-210ENST00000560383 C2orf42Q9NWW7 574 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 DACH1Q9UI36 760 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 CPQQ9Y646 472 aa16■□□□□ 0.15
SNRPA1-210ENST00000560383 SPAG17Q6Q759 2223 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 O00370 1275 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 HRO43593 1189 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 FOXD2O60548 495 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 VDRP11473 427 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 ZNF132P52740 706 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 SGO2Q562F6 1265 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 RAB41Q5JT25 222 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 PRR23BQ6ZRT6 265 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 TTC30AQ86WT1 665 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 DDX42Q86XP3 938 aaKnown RBP eCLIP15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 KAT5Q92993 513 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 JAKMIP2Q96AA8 810 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 INTS2Q9H0H0 1204 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 CCSER2Q9H7U1 834 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 PARD6AQ9NPB6 346 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 USP18Q9UMW8 372 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 WNT6Q9Y6F9 365 aa15.99■□□□□ 0.15
SNRPA1-210ENST00000560383 LAMA1P25391 3075 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms