RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 NUGGCQ68CJ6 796 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 PMF1Q6P1K2 205 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 DARS2Q6PI48 645 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 STRADAQ7RTN6 431 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 TRPM8Q7Z2W7 1104 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 SPATA21Q7Z572 469 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 ACOT1Q86TX2 421 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 PSTKQ8IV42 348 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 SUGP1Q8IWZ8 645 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 ANKRD42Q8N9B4 389 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 FAM172AQ8WUF8 416 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 KAT2BQ92831 832 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 APBB2Q92870 758 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 KHSRPQ92945 711 aaKnown RBP eCLIP8.43□□□□□ -1.062e-8■■■■■ 28.6
SMAD3-212ENST00000559937 TNIP3Q96KP6 325 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 ZMAT2Q96NC0 199 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 TGS1Q96RS0 853 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 C11orf84Q9BUA3 381 aaPredicted RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 SNRNP25Q9BV90 132 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 EIF2AQ9BY44 585 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 TRIM6Q9C030 488 aaPredicted RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 RCOR3Q9P2K3 495 aaPredicted RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 XPO7Q9UIA9 1087 aaKnown RBP8.43□□□□□ -1.06
SMAD3-212ENST00000559937 RABGEF1Q9UJ41 708 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 SLC12A4Q9UP95 1085 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 ARL2BPQ9Y2Y0 163 aa8.43□□□□□ -1.06
SMAD3-212ENST00000559937 TDRD15B5MCY1 1934 aaKnown RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 CFAP73A6NFT4 308 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 A8MXQ7 604 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 KPNA7A9QM74 516 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 HACD1B0YJ81 288 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 DNM1LO00429 736 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PPEF2O14830 753 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TM9SF1O15321 606 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 DYNC1LI2O43237 492 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PAPSS1O43252 624 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TYROBPO43914 113 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 RASSF9O75901 435 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 GNAT1P11488 350 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 ALADP13716 330 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 KRT15P19012 456 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TAC1P20366 129 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 LRPAP1P30533 357 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 HOXC8P31273 242 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 GBP2P32456 591 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 SCTRP47872 440 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 RGS7P49802 495 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 CRYBB1P53674 252 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PDE4CQ08493 712 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 CCDC15Q0P6D6 951 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 SNX17Q15036 470 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 LRRC14Q15048 493 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 MTFR1Q15390 333 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TAF5Q15542 800 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PKN2Q16513 984 aaKnown RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PDK4Q16654 411 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 SOWAHAQ2M3V2 549 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 C15orf59Q2T9L4 293 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 BBS9Q3SYG4 887 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 EFHC1Q5JVL4 640 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 FNBP1LQ5T0N5 605 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 RNF43Q68DV7 783 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 BZW1Q7L1Q6 419 aaKnown RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TLK2Q86UE8 772 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PALM2Q8IXS6 379 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TOP6BLQ8N6T0 577 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PLD5Q8N7P1 536 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 FAM71DQ8N9W8 422 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 MCUQ8NE86 351 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 FBXO36Q8NEA4 188 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 OR6B3Q8NGW1 331 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PCDH19Q8TAB3 1148 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 MGARPQ8TDB4 240 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 KBTBD7Q8WVZ9 684 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 CYTH2Q99418 400 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 OSMRQ99650 979 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 KLC2Q9H0B6 622 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 FAM49AQ9H0Q0 323 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 SNX25Q9H3E2 840 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 USP29Q9HBJ7 922 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 NGRNQ9NPE2 291 aaKnown RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 FGFR1OP2Q9NVK5 253 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 PRKAG3Q9UGI9 489 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TUBGCP4Q9UGJ1 667 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TBK1Q9UHD2 729 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 TEX264Q9Y6I9 313 aa8.42□□□□□ -1.06
SMAD3-212ENST00000559937 SF3B1O75533 1304 aaKnown RBP eCLIP8.42□□□□□ -1.063e-7■■■■■ 111.2
SMAD3-212ENST00000559937 COL4A4P53420 1690 aaPredicted RBP8.42□□□□□ -1.06
SMAD3-212ENST00000559937 IQANK1A0A1B0GTG1 560 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 SMIM28A0A1B0GU29 152 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 C17orf102A2RUQ5 167 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 TRDMT1O14717 391 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 XPO1O14980 1071 aaKnown RBP8.41□□□□□ -1.06
SMAD3-212ENST00000559937 ADCY6O43306 1168 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 KPNA6O60684 536 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 HUS1O60921 280 aa8.41□□□□□ -1.06
SMAD3-212ENST00000559937 DAB1O75553 588 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms