RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 DPYSL4O14531 572 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 VNN1O95497 513 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 C4BPAP04003 597 aaKnown RBP9.65□□□□□ -0.86
IDH3A-217ENST00000559889 TDGF1P13385 188 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 BDNFP23560 247 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 DDX6P26196 483 aaKnown RBP eCLIP9.65□□□□□ -0.86
IDH3A-217ENST00000559889 CTHP32929 405 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 GNL1P36915 607 aaPredicted RBP9.65□□□□□ -0.86
IDH3A-217ENST00000559889 C4orf50Q6ZRC1 276 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 MTERF4Q7Z6M4 381 aaKnown RBP9.65□□□□□ -0.86
IDH3A-217ENST00000559889 CCDC170Q8IYT3 715 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 TTC8Q8TAM2 541 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 CSGALNACT1Q8TDX6 532 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 JAKMIP2Q96AA8 810 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 ELMO3Q96BJ8 720 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 CHFRQ96EP1 664 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 MSANTD3Q96H12 275 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 SPATA17Q96L03 361 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 SLC22A12Q96S37 553 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 SEMA4AQ9H3S1 761 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 DPEP3Q9H4B8 488 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 HAUS4Q9H6D7 363 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 VRTNQ9H8Y1 702 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 LMAN1LQ9HAT1 526 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 TDP1Q9NUW8 608 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 ARHGAP20Q9P2F6 1191 aa9.65□□□□□ -0.86
IDH3A-217ENST00000559889 EP300Q09472 2414 aaPredicted RBP9.65□□□□□ -0.87
IDH3A-217ENST00000559889 MACROD2A1Z1Q3 448 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SPECC1L-ADORA2AF8WAN1 911 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 KRT86O43790 486 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 AFPP02771 609 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 ATICP31939 592 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 AVPR1AP37288 418 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 EIF4A3P38919 411 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 CACNA2D1P54289 1103 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 USP46P62068 366 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 CSTF1Q05048 431 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 RAPGEF1Q13905 1077 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 MAPRE1Q15691 268 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 C1orf220Q5T0J3 134 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 TSSK4Q6SA08 328 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 VSTM1Q6UX27 236 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SCN4BQ8IWT1 228 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 CYP2S1Q96SQ9 504 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 PDCL3Q9H2J4 239 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 C8orf33Q9H7E9 229 aaPredicted RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 UXTQ9UBK9 157 aaPredicted RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 MRFAP1Q9Y605 127 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 GPR179Q6PRD1 2367 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 EIF3CLB5ME19 914 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 ENC1O14682 589 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 LMNAP02545 664 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SLC9A1P19634 815 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 KPNA1P52294 538 aaPredicted RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 KIF11P52732 1056 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 TNNC1P63316 161 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 KIF5AQ12840 1032 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 TRPC3Q13507 836 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 MDH1BQ5I0G3 518 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 ZC3H14Q6PJT7 736 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 RALGPS2Q86X27 583 aaPredicted RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SUMF1Q8NBK3 374 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 ZBTB44Q8NCP5 570 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 OR6B3Q8NGW1 331 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 BAP1Q92560 729 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 EIF3CQ99613 913 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SNX25Q9H3E2 840 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SMYD3Q9H7B4 428 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 HPS4Q9NQG7 708 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 GKN1Q9NS71 199 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 RBM12Q9NTZ6 932 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 GCNT4Q9P109 453 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
IDH3A-217ENST00000559889 DUSP10Q9Y6W6 482 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 SPTBN4Q9H254 2564 aa9.64□□□□□ -0.87
IDH3A-217ENST00000559889 C2orf78A6NCI8 922 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 OBSL1O75147 1896 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 PTPN1P18031 435 aaKnown RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 AP3M2P53677 418 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 CDH8P55286 799 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 NCOA4Q13772 614 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 ZNF268Q14587 947 aaPredicted RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 EXOC3L4Q17RC7 722 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 ZACNQ401N2 412 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 SFMBT2Q5VUG0 894 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 ZC3H3Q8IXZ2 948 aaKnown RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 FAM186BQ8IYM0 893 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 CEP295NLQ96MC4 621 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 NAPGQ99747 312 aaPredicted RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 SDCBP2Q9H190 292 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 METTL14Q9HCE5 456 aaKnown RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 KIF26AQ9ULI4 1882 aaPredicted RBP9.63□□□□□ -0.87
IDH3A-217ENST00000559889 FANCMQ8IYD8 2048 aa9.63□□□□□ -0.87
IDH3A-217ENST00000559889 DENND4CQ5VZ89 1909 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms