RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 HFE2Q6ZVN8 426 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 OSBPL9Q96SU4 736 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 TUBB2BQ9BVA1 445 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 FBXO44Q9H4M3 255 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 POPDC2Q9HBU9 364 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
HERC1-205ENST00000559886 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.77□□□□□ -0.37
HERC1-205ENST00000559886 SCML2Q9UQR0 700 aa12.77□□□□□ -0.37
HERC1-205ENST00000559886 FAM92AA1XBS5 289 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CCDC66A2RUB6 948 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 FSCN2O14926 492 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 RTN3O95197 1032 aaPredicted RBP12.76□□□□□ -0.37
HERC1-205ENST00000559886 LTFP02788 710 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 FYNP06241 537 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CTNNA2P26232 953 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 SDC4P31431 198 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CA8P35219 290 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
HERC1-205ENST00000559886 RAB30Q15771 203 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CC2D1AQ6P1N0 951 aaPredicted RBP12.76□□□□□ -0.37
HERC1-205ENST00000559886 TCEAL8Q8IYN2 117 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 ARFGAP1Q8N6T3 406 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 GPR152Q8TDT2 470 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CFAP57Q96MR6 1250 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 KLHL5Q96PQ7 755 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CYP4F11Q9HBI6 524 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 USTQ9Y2C2 406 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 PCDHA3Q9Y5H8 950 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 H3BNC9 293 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 LRCH4O75427 683 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 ADH1AP07327 375 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 NOS2P35228 1153 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 RGS19P49795 217 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 PEX5P50542 639 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 DNA2P51530 1060 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 USP46P62068 366 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 PLPP4Q5VZY2 271 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 LILRA6Q6PI73 481 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 BEND5Q7L4P6 421 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 DEFB106AQ8N104 65 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 UBL4BQ8N7F7 174 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 STKLD1Q8NE28 680 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 KRT35Q92764 455 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 NT5C3BQ969T7 300 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 PSMB7Q99436 277 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 EMILIN2Q9BXX0 1053 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 CDC23Q9UJX2 597 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 MRFAP1Q9Y605 127 aa12.76□□□□□ -0.37
HERC1-205ENST00000559886 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 HIDE1A8MVS5 230 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 KCNK3O14649 394 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 SRGAP2O75044 1071 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 RNF8O76064 485 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 CXCR5P32302 372 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 ELF1P32519 619 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 MARCKSL1P49006 195 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 TAS2R40P59535 323 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 IFRD2Q12894 506 aaPredicted RBP12.75□□□□□ -0.37
HERC1-205ENST00000559886 C15orf59Q2T9L4 293 aaPredicted RBP12.75□□□□□ -0.37
HERC1-205ENST00000559886 DCAF6Q58WW2 860 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 BSPRYQ5W0U4 402 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 CENPIQ92674 756 aaPredicted RBP12.75□□□□□ -0.37
HERC1-205ENST00000559886 ALG3Q92685 438 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 TRIM62Q9BVG3 475 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 NKX2-4Q9H2Z4 354 aa12.75□□□□□ -0.37
HERC1-205ENST00000559886 CES2O00748 559 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 PRRG1O14668 218 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 TGM5O43548 720 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 PSTPIP1O43586 416 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 TCF4P15884 667 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 YWHAQP27348 245 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 PCK1P35558 622 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 ATP11AP98196 1134 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 GPM6BQ13491 265 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 SLC25A52Q3SY17 297 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 SH3PXD2AQ5TCZ1 1133 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 LRRC38Q5VT99 294 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 SYPL2Q5VXT5 272 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 MON1AQ86VX9 555 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 RHOT1Q8IXI2 618 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 GIPC2Q8TF65 315 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 PBKQ96KB5 322 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 NCAPGQ9BPX3 1015 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.74□□□□□ -0.37
HERC1-205ENST00000559886 YIPF1Q9Y548 306 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 SLC38A8A6NNN8 435 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 ZNF185O15231 689 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 DESP17661 470 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 KLRC2P26717 231 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 ALDH1A3P47895 512 aa12.74□□□□□ -0.37
HERC1-205ENST00000559886 YWHAGP61981 247 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms