RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 OSER1Q9NX31 292 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 CFAP97Q9P2B7 532 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 CHORDC1Q9UHD1 332 aaPredicted RBP11.55□□□□□ -0.56
SPG11-216ENST00000559347 TSPAN16Q9UKR8 245 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 SCML2Q9UQR0 700 aa11.55□□□□□ -0.56
SPG11-216ENST00000559347 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPG11-216ENST00000559347 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
SPG11-216ENST00000559347 FGFR1OPO95684 399 aaKnown RBP11.54□□□□□ -0.56
SPG11-216ENST00000559347 CYP17A1P05093 508 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 CCR3P51677 355 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 BCAT1P54687 386 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 AMPD2Q01433 879 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 SATB1Q01826 763 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 GCNT1Q02742 428 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 CSTF1Q05048 431 aaKnown RBP11.54□□□□□ -0.56
SPG11-216ENST00000559347 CETN1Q12798 172 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 GAB4Q2WGN9 574 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 DPCR1Q3MIW9 517 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 SGO2Q562F6 1265 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 RAB41Q5JT25 222 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 TSSK4Q6SA08 328 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 TMEM270Q6UE05 265 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 ARHGEF19Q8IW93 802 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 SYNPOQ8N3V7 929 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 SPEM1Q8N4L4 309 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 MLKLQ8NB16 471 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 KAT5Q92993 513 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 NKD2Q969F2 451 aaPredicted RBP11.54□□□□□ -0.56
SPG11-216ENST00000559347 LINC00597Q9H2U6 94 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 NMUR1Q9HB89 426 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPG11-216ENST00000559347 USP3Q9Y6I4 520 aa11.54□□□□□ -0.56
SPG11-216ENST00000559347 A0A1W2PQH9 124 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 E2F8A0AVK6 867 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 O00370 1275 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 SLC9A3R1O14745 358 aaPredicted RBP11.53□□□□□ -0.56
SPG11-216ENST00000559347 PAPSS2O95340 614 aaPredicted RBP11.53□□□□□ -0.56
SPG11-216ENST00000559347 EGFP01133 1207 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 PAEPP09466 180 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 IRF1P10914 325 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 CD19P15391 556 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 BST2Q10589 180 aaKnown RBP11.53□□□□□ -0.56
SPG11-216ENST00000559347 PPP2R5DQ14738 602 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 PIGZQ86VD9 579 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 IRF2BP1Q8IU81 584 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 ANKRD52Q8NB46 1076 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 EZH1Q92800 747 aaPredicted RBP11.53□□□□□ -0.56
SPG11-216ENST00000559347 CD101Q93033 1021 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 WBP2Q969T9 261 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 P2RY13Q9BPV8 354 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 NACA2Q9H009 215 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 INTS2Q9H0H0 1204 aaKnown RBP11.53□□□□□ -0.56
SPG11-216ENST00000559347 FBRSL1Q9HCM7 1045 aaKnown RBP11.53□□□□□ -0.56
SPG11-216ENST00000559347 C2orf42Q9NWW7 574 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 PCDHGA2Q9Y5H1 932 aa11.53□□□□□ -0.56
SPG11-216ENST00000559347 GVINP1Q7Z2Y8 2422 aa11.52□□□□□ -0.56
SPG11-216ENST00000559347 OTOGLQ3ZCN5 2332 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 FAM186AA6NE01 2351 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 TULP2O00295 520 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.57
SPG11-216ENST00000559347 LILRB5O75023 590 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 RNF40O75150 1001 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 TBX18O95935 607 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 SETSIPP0DME0 302 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 VDRP11473 427 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 RARGP13631 454 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 DRD1P21728 446 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 OPRD1P41143 372 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 PSEN1P49768 467 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 ZNF132P52740 706 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 SLC8A3P57103 927 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 PDE4CQ08493 712 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 GRSF1Q12849 480 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPG11-216ENST00000559347 NR1H3Q13133 447 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 KLHDC10Q6PID8 442 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 RRAGAQ7L523 313 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 SCD5Q86SK9 330 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.57
SPG11-216ENST00000559347 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 TFAP2BQ92481 460 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 OTUB2Q96DC9 234 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 KREMEN1Q96MU8 473 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 GBP4Q96PP9 640 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 KLF16Q9BXK1 252 aaPredicted RBP11.52□□□□□ -0.57
SPG11-216ENST00000559347 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
SPG11-216ENST00000559347 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 SEMA4AQ9H3S1 761 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 ZSCAN32Q9NX65 697 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 CLIC5Q9NZA1 410 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 TBC1D14Q9P2M4 693 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 HESX1Q9UBX0 185 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 NAGPAQ9UK23 515 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPG11-216ENST00000559347 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 PCDHB4Q9Y5E5 795 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.57
SPG11-216ENST00000559347 SPAG17Q6Q759 2223 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms