RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TUBP50607 506 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 TAF10Q12962 218 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 EIF4EBP2Q13542 120 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 MTF1Q14872 753 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 RARS2Q5T160 578 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 FAM183BPQ6ZVS7 135 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 BNIPLQ7Z465 357 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 MON1AQ86VX9 555 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 SCUBE3Q8IX30 993 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 C3orf20Q8ND61 904 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 PDZD8Q8NEN9 1154 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 SMG7Q92540 1137 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 ANP32BQ92688 251 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 PDCL3Q9H2J4 239 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 KCNF1Q9H3M0 494 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 NMUR1Q9HB89 426 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 OSER1Q9NX31 292 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 COG5Q9UP83 839 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 DOCK8Q8NF50 2099 aa15.56■□□□□ 0.08
SNRPA1-207ENST00000559309 NUP210Q8TEM1 1887 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 ANKRD62A6NC57 917 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 SART1O43290 800 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 OAS1P00973 400 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 CALB1P05937 261 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 USP17L7P0C7H9 530 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 COL9A1P20849 921 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 SNX16P57768 344 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 SLC6A3Q01959 620 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 CCDC85BQ15834 202 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 C10orf76Q5T2E6 689 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 HFE2Q6ZVN8 426 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 GRASPQ7Z6J2 395 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 ELMOD1Q8N336 334 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 SHKBP1Q8TBC3 707 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 NT5C3BQ969T7 300 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 SLC2A13Q96QE2 648 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 UHRF1Q96T88 793 aaPredicted RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 C11orf70Q9BRQ4 267 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 MIS12Q9H081 205 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 ASAH2Q9NR71 780 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 SPTLC3Q9NUV7 552 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 ADAM22Q9P0K1 906 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 WDR35Q9P2L0 1181 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 CD207Q9UJ71 328 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 CDH22Q9UJ99 828 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 INTUQ9ULD6 942 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 STRIP2Q9ULQ0 834 aa15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 HELZP42694 1942 aaKnown RBP15.55■□□□□ 0.08
SNRPA1-207ENST00000559309 CLUHO75153 1309 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 GRXCR2A6NFK2 248 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 ARHGAP6O43182 974 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 AKR1B10O60218 316 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 CYP1A2P05177 515 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 MYBL1P10243 752 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 LCP1P13796 627 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 PFKLP17858 780 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 RRM1P23921 792 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 CDC25CP30307 473 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 GALCP54803 685 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 NTHL1P78549 312 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 LEXMQ3ZCV2 418 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 PABPC1LQ4VXU2 614 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 C2CD6Q53TS8 623 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 CCDC122Q5T0U0 273 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 KLHDC10Q6PID8 442 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 DNAAF5Q86Y56 855 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 SIX6OS1Q8N1H7 587 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 IPO4Q8TEX9 1081 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 NDRG1Q92597 394 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 HLA-CQ95604 372 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 FBXO32Q969P5 355 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 TCEAL4Q96EI5 215 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 SLITRK1Q96PX8 696 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 CORO1BQ9BR76 489 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 GMIPQ9P107 970 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 KIF26AQ9ULI4 1882 aaPredicted RBP15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 C5orf42Q9H799 3197 aa15.54■□□□□ 0.08
SNRPA1-207ENST00000559309 A0A1W2PQH9 124 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 SIGLEC16A6NMB1 481 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 PIK3R2O00459 728 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 PJA2O43164 708 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 MBTPS2O43462 519 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 IGLV3-25P01717 112 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 TMEM253P0C7T8 217 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 GABRR2P28476 465 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 MTHFRP42898 656 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 SMAD4Q13485 552 aaKnown RBP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 TAF5Q15542 800 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 EFHC1Q5JVL4 640 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 CYP4A22Q5TCH4 519 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 TRNP1Q6NT89 227 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 MSANTD2Q6P1R3 559 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 ARHGAP18Q8N392 663 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 MSANTD4Q8NCY6 345 aa15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.53■□□□□ 0.08
SNRPA1-207ENST00000559309 TRIM11Q96F44 468 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms