RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LRRC53A6NM62 1247 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 E5RJQ4 531 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 ERBB2P04626 1255 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 GYPCP04921 128 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 LCP1P13796 627 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 DDX6P26196 483 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX1-204ENST00000559061 TUBP50607 506 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 NOMO3P69849 1222 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 GPC5P78333 572 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 SLC7A9P82251 487 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 ZXDAP98168 799 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 PTK2Q05397 1052 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 FCHO2Q0JRZ9 810 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 TDGQ13569 410 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 ZNF268Q14587 947 aaPredicted RBP12.03□□□□□ -0.48
SNX1-204ENST00000559061 ARHGAP15Q53QZ3 475 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 SARM1Q6SZW1 724 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 MTSS1LQ765P7 747 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 TMEM110Q86TL2 294 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 STK32AQ8WU08 396 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 P2RY11Q96G91 374 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 ZFYVE19Q96K21 471 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
SNX1-204ENST00000559061 SLITRK1Q96PX8 696 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 FBXO44Q9H4M3 255 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 SLITRK6Q9H5Y7 841 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 ZFP14Q9HCL3 533 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 TRPM5Q9NZQ8 1165 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 ARHGAP26Q9UNA1 814 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 SORCS3Q9UPU3 1222 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 KMT2EQ8IZD2 1858 aa12.03□□□□□ -0.48
SNX1-204ENST00000559061 TRAV19A0A0A6YYK7 116 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 OTOL1A6NHN0 477 aaPredicted RBP12.02□□□□□ -0.49
SNX1-204ENST00000559061 DCXO43602 365 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 TLR5O60602 858 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 ZBED1O96006 694 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 CYP1A1P04798 512 aaPredicted RBP12.02□□□□□ -0.49
SNX1-204ENST00000559061 TCF3P15923 654 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 TRIM21P19474 475 aaKnown RBP12.02□□□□□ -0.49
SNX1-204ENST00000559061 STAT1P42224 750 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 PPP3CCP48454 512 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 CDR2Q01850 454 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 TAF5Q15542 800 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 FILIP1LQ4L180 1135 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 PDZD8Q8NEN9 1154 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 NXPE3Q969Y0 559 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 HSFY1Q96LI6 401 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 KLF16Q9BXK1 252 aaPredicted RBP12.02□□□□□ -0.49
SNX1-204ENST00000559061 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 HPS4Q9NQG7 708 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 CNGB3Q9NQW8 809 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 SLC2A4RGQ9NR83 387 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 TDP1Q9NUW8 608 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 ITIH6Q6UXX5 1313 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 CUL9Q8IWT3 2517 aa12.02□□□□□ -0.49
SNX1-204ENST00000559061 KRBA1A5PL33 1030 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 LEFTY2O00292 366 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 SCAMP3O14828 347 aaKnown RBP12.01□□□□□ -0.49
SNX1-204ENST00000559061 MED7O43513 233 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 PDGFBP01127 241 aaPredicted RBP12.01□□□□□ -0.49
SNX1-204ENST00000559061 SRFP11831 508 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 UNGP13051 313 aaPredicted RBP12.01□□□□□ -0.49
SNX1-204ENST00000559061 RARGP13631 454 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 PFKLP17858 780 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 HDCP19113 662 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 PDE6CP51160 858 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 YWHAGP61981 247 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNX1-204ENST00000559061 TPM4P67936 248 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 PITX1P78337 314 aaPredicted RBP12.01□□□□□ -0.49
SNX1-204ENST00000559061 GOLGA8FQ08AF8 430 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 GOLGA8DPQ0D2H9 430 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 PTP4A2Q12974 167 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 HECTD3Q5T447 861 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 OTUD1Q5VV17 481 aaPredicted RBP12.01□□□□□ -0.49
SNX1-204ENST00000559061 HGSNATQ68CP4 663 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 TRNP1Q6NT89 227 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 VSTM4Q8IW00 320 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 MFSD6LQ8IWD5 586 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 ZNF276Q8N554 614 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 SH3RF2Q8TEC5 729 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 EDAQ92838 391 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 SPAG5Q96R06 1193 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 FAM83CQ9BQN1 747 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 DNAI2Q9GZS0 605 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 LRRC4Q9HBW1 653 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 TLR8Q9NR97 1041 aaKnown RBP12.01□□□□□ -0.49
SNX1-204ENST00000559061 GKN1Q9NS71 199 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 SMPD4Q9NXE4 827 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 OBP2AQ9NY56 170 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 EHD2Q9NZN4 543 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 MYO6Q9UM54 1294 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 CPQQ9Y646 472 aa12.01□□□□□ -0.49
SNX1-204ENST00000559061 KIAA1549LQ6ZVL6 1849 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms