RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 RCAN1P53805 252 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 STARD6P59095 220 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 PRR5P85299 388 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 AKAP17AQ02040 695 aaKnown RBP6.69□□□□□ -1.34
ZEB1-211ENST00000558440 CREMQ03060 361 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 HTR4Q13639 388 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 NECTIN1Q15223 517 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 ZNF528Q3MIS6 628 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 TAS1R1Q7RTX1 841 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 MRPL10Q7Z7H8 261 aaKnown RBP6.69□□□□□ -1.34
ZEB1-211ENST00000558440 PALB2Q86YC2 1186 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 SUMF1Q8NBK3 374 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 CNNM3Q8NE01 707 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 CCDC148Q8NFR7 591 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 ATRIPQ8WXE1 791 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 SLC5A5Q92911 643 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 RELTQ969Z4 430 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 LENG9Q96B70 501 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 ZNF707Q96C28 371 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-211ENST00000558440 TCEANC2Q96MN5 208 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 SH2D3AQ9BRG2 576 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 RNF38Q9H0F5 515 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 NT5C3AQ9H0P0 336 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 CCSER2Q9H7U1 834 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 RXFP1Q9HBX9 757 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.69□□□□□ -1.34
ZEB1-211ENST00000558440 ZDHHC7Q9NXF8 308 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 FBLN5Q9UBX5 448 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 APEX2Q9UBZ4 518 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 FBXO4Q9UKT5 387 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 COL4A3BPQ9Y5P4 624 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 ZFP37Q9Y6Q3 630 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-211ENST00000558440 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 ADAMTS20P59510 1910 aa6.69□□□□□ -1.34
ZEB1-211ENST00000558440 COL4A3Q01955 1670 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 TICRRQ7Z2Z1 1910 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 TRBV23OR9-2A0A075B6M9 112 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 KANSL1LA0AUZ9 987 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 PRR5-ARHGAP8B1AHC4 643 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ANHXE9PGG2 379 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ADAMTS3O15072 1205 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 TGM5O43548 720 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ERLIN2O94905 339 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 C1RP00736 705 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 SRGAP2CP0DJJ0 459 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 GLULP15104 373 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 NCLP19338 710 aaKnown RBP6.68□□□□□ -1.34
ZEB1-211ENST00000558440 MAGEA9P43362 315 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ARHGAP8P85298 464 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
ZEB1-211ENST00000558440 DSG1Q02413 1049 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 CSTF1Q05048 431 aaKnown RBP6.68□□□□□ -1.34
ZEB1-211ENST00000558440 UBXN2BQ14CS0 331 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 USP41Q3LFD5 358 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 MTSS1LQ765P7 747 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 SRGAP1Q7Z6B7 1085 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 EXOC8Q8IYI6 725 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 COLGALT2Q8IYK4 626 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 LZTR1Q8N653 840 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ST13P5Q8NFI4 369 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-211ENST00000558440 GJA10Q969M2 543 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 CEP89Q96ST8 783 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 COLEC11Q9BWP8 271 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 IFT122Q9HBG6 1241 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 LUC7LQ9NQ29 371 aaKnown RBP6.68□□□□□ -1.34
ZEB1-211ENST00000558440 MARCH5Q9NX47 278 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 PCDHGA2Q9Y5H1 932 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ZZEF1O43149 2961 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 GREB1Q4ZG55 1949 aa6.68□□□□□ -1.34
ZEB1-211ENST00000558440 ARL5CA6NH57 179 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 OTOL1A6NHN0 477 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 PRPF3O43395 683 aaKnown RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 DKC1O60832 514 aaKnown RBP eCLIP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 PSMD10O75832 226 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 STBD1O95210 358 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 HMGB1P09429 215 aaKnown RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 ATF2P15336 505 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 PAMP19021 973 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 MLH1P40692 756 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 SCNN1GP51170 649 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 ZNF143P52747 638 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 ATXN1P54253 815 aaKnown RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 PSMC5P62195 406 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 GPC5P78333 572 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 PFKPQ01813 784 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 NCBP1Q09161 790 aaKnown RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 KRT32Q14532 448 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 MLF2Q15773 248 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 Q4G0T1 1027 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 UBXN11Q5T124 520 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 LIN9Q5TKA1 542 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 PLA2G4FQ68DD2 849 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 FUT10Q6P4F1 479 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 ANO5Q75V66 913 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 CPNE8Q86YQ8 564 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 HACE1Q8IYU2 909 aa6.67□□□□□ -1.34
ZEB1-211ENST00000558440 RNF168Q8IYW5 571 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 MAML2Q8IZL2 1156 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 TP53I13Q8NBR0 393 aaPredicted RBP6.67□□□□□ -1.34
ZEB1-211ENST00000558440 NETO2Q8NC67 525 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms