RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 NT5C1AQ9BXI3 368 aa14.4□□□□□ -0.1
SNRPA1-204ENST00000558020 CSNK1G1Q9HCP0 422 aa14.4□□□□□ -0.1
SNRPA1-204ENST00000558020 DEC1Q9P2X7 70 aa14.4□□□□□ -0.1
SNRPA1-204ENST00000558020 HPSEQ9Y251 543 aa14.4□□□□□ -0.1
SNRPA1-204ENST00000558020 TBC1D3BA6NDS4 549 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 MAP3K13O43283 966 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 TLR5O60602 858 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 RHOBTB3O94955 611 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 CAVIN2O95810 425 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 HLA-DRAP01903 254 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 ADRB1P08588 477 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 ZDHHC11BP0C7U3 371 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 PSMC2P35998 433 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 ATP5C1P36542 298 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 SLC6A11P48066 632 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 MAP3K7CLP57077 242 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 CCDC6Q16204 474 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 NFIL3Q16649 462 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 GAB4Q2WGN9 574 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 ANO4Q32M45 955 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 LY6G5CQ5SRR4 150 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 STPG1Q5TH74 334 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 TADA2BQ86TJ2 420 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 RASSF3Q86WH2 238 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 TTC39CQ8N584 583 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 HNRNPABQ99729 332 aaKnown RBP14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 SDCBP2Q9H190 292 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 CCSER2Q9H7U1 834 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 GMIPQ9P107 970 aa14.39□□□□□ -0.11
SNRPA1-204ENST00000558020 SPTBN2O15020 2390 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 FAM237AA0A1B0GTK4 181 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 A0A1W2PQ27 194 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 A0A1W2PQ64 194 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 A0A1W2PQD8 194 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 BCLAF3A2AJT9 711 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 SCAMP3O14828 347 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 DCLK1O15075 740 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 HOXC11O43248 304 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 STX10O60499 249 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 KLF8O95600 359 aaPredicted RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 CCDC130P13994 396 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 GTF2H1P32780 548 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 TIE1P35590 1138 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 NDUFA8P51970 172 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 ADAM9Q13443 819 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 RNF43Q68DV7 783 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 SDE2Q6IQ49 451 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 FAM186BQ8IYM0 893 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 GUF1Q8N442 669 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 C12orf29Q8N999 325 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 TXNDC5Q8NBS9 432 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 WHAMMQ8TF30 809 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 CYFIP2Q96F07 1278 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 SPACA7Q96KW9 195 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 SMOQ99835 787 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 SPHK2Q9NRA0 654 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 FAM49BQ9NUQ9 324 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 WDR35Q9P2L0 1181 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 LSM7Q9UK45 103 aaKnown RBP14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 SCML2Q9UQR0 700 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 PCDHA5Q9Y5H7 936 aa14.38□□□□□ -0.11
SNRPA1-204ENST00000558020 KHNYNO15037 678 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 ADORA2BP29275 332 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 ASPAP45381 313 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 GCLMP48507 274 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 PSEN1P49768 467 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 INCA1Q0VD86 236 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 DPYDQ12882 1025 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 KRBA2Q6ZNG9 492 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 HTR3DQ70Z44 454 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 LPCAT2Q7L5N7 544 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 PGBD3Q8N328 593 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 NAT16Q8N8M0 369 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 IL17RCQ8NAC3 791 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 ELMO3Q96BJ8 720 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 FAXDC2Q96IV6 333 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 ZFRQ96KR1 1074 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 XPO6Q96QU8 1125 aaKnown RBP14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 TPSD1Q9BZJ3 242 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 NIF3L1Q9GZT8 377 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.37□□□□□ -0.111e-15■■■■■ 72.7
SNRPA1-204ENST00000558020 CIZ1Q9ULV3 898 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 MAPK8IP1Q9UQF2 711 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 INVSQ9Y283 1065 aa14.37□□□□□ -0.11
SNRPA1-204ENST00000558020 TULP3O75386 442 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 BEST1O76090 585 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 ZNF202O95125 648 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 IRF1P10914 325 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 ACO1P21399 889 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 DPP6P42658 865 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 KIR2DL1P43626 348 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 PLA2G4AP47712 749 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 SLC8A3P57103 927 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 KDSRQ06136 332 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 ORC1Q13415 861 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 SPDYCQ5MJ68 293 aa14.36□□□□□ -0.11
SNRPA1-204ENST00000558020 C1orf220Q5T0J3 134 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms