RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 NAT16Q8N8M0 369 aa19.5■□□□□ 0.71
ABCD4-228ENST00000557588 ZNF419Q96HQ0 510 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-228ENST00000557588 MRPL45Q9BRJ2 306 aaKnown RBP19.5■□□□□ 0.71
ABCD4-228ENST00000557588 FAM124BQ9H5Z6 455 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-228ENST00000557588 SPHK2Q9NRA0 654 aa19.5■□□□□ 0.71
ABCD4-228ENST00000557588 CYP8B1Q9UNU6 501 aa19.5■□□□□ 0.71
ABCD4-228ENST00000557588 FRMD3A2A2Y4 597 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 TACC1O75410 805 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 GJB2P29033 226 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 TUBP50607 506 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 DUOXA2Q1HG44 320 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 PLEKHG6Q3KR16 790 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 EGFLAMQ63HQ2 1017 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 USP49Q70CQ1 688 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 HS2ST1Q7LGA3 356 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 GLRX5Q86SX6 157 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 BBS7Q8IWZ6 715 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 NOC3LQ8WTT2 800 aaKnown RBP19.49■□□□□ 0.71
ABCD4-228ENST00000557588 EPSTI1Q96J88 318 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 MMS19Q96T76 1030 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 FGFBP2Q9BYJ0 223 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 ZNF518BQ9C0D4 1074 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 PCIF1Q9H4Z3 704 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 SH3BP1Q9Y3L3 701 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 PCDHB9Q9Y5E1 797 aa19.49■□□□□ 0.71
ABCD4-228ENST00000557588 PTPRBP23467 1997 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 CBFA2T3O75081 653 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 RTN3O95197 1032 aaPredicted RBP19.48■□□□□ 0.71
ABCD4-228ENST00000557588 YWHAQP27348 245 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 WASP42768 502 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 GRIK2Q13002 908 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 SF3A1Q15459 793 aaKnown RBP19.48■□□□□ 0.71
ABCD4-228ENST00000557588 SURF1Q15526 300 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 HECTD3Q5T447 861 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 SNX30Q5VWJ9 437 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 WDR49Q8IV35 697 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 NUP93Q8N1F7 819 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 PNPLA1Q8N8W4 532 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 IPO4Q8TEX9 1081 aaKnown RBP19.48■□□□□ 0.71
ABCD4-228ENST00000557588 FBXO32Q969P5 355 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 GABRG3Q99928 467 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 ZDHHC5Q9C0B5 715 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 SNX25Q9H3E2 840 aa19.48■□□□□ 0.71
ABCD4-228ENST00000557588 APOBEC2Q9Y235 224 aaKnown RBP19.48■□□□□ 0.71
ABCD4-228ENST00000557588 TRIM24O15164 1050 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 ZBTB24O43167 697 aaPredicted RBP19.47■□□□□ 0.71
ABCD4-228ENST00000557588 FAM163BP0C2L3 166 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 GNSP15586 552 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 PTPN1P18031 435 aaKnown RBP19.47■□□□□ 0.71
ABCD4-228ENST00000557588 GNL1P36915 607 aaPredicted RBP19.47■□□□□ 0.71
ABCD4-228ENST00000557588 IFRD2Q12894 506 aaPredicted RBP19.47■□□□□ 0.71
ABCD4-228ENST00000557588 ANO4Q32M45 955 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 SYCP2LQ5T4T6 812 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 GRAMD4Q6IC98 578 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 BRAPQ7Z569 592 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 TMEM25Q86YD3 366 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 CBWD2Q8IUF1 395 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 CHPFQ8IZ52 775 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 FOXJ1Q92949 421 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 ACOX2Q99424 681 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 DPEP3Q9H4B8 488 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 CD93Q9NPY3 652 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 SCUBE2Q9NQ36 999 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 CCDC39Q9UFE4 941 aa19.47■□□□□ 0.71
ABCD4-228ENST00000557588 ZNF233A6NK53 670 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 CACNG3O60359 315 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 WDR45BQ5MNZ6 344 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 SDE2Q6IQ49 451 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 TOGARAM2Q6ZUX3 1019 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 SV2BQ7L1I2 683 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 TRAPPC11Q7Z392 1133 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 RGL4Q8IZJ4 473 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 B3GALNT2Q8NCR0 500 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 MDM1Q8TC05 714 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 MRGPRX1Q96LB2 322 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 CCSER2Q9H7U1 834 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 IL37Q9NZH6 218 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 DKK4Q9UBT3 224 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 PCOLCE2Q9UKZ9 415 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 NFE2L3Q9Y4A8 694 aa19.46■□□□□ 0.71
ABCD4-228ENST00000557588 HELZ2Q9BYK8 2649 aaKnown RBP19.46■□□□□ 0.71
ABCD4-228ENST00000557588 FAM92AA1XBS5 289 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 CLDN5O00501 218 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 NDUFS2O75306 463 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 PRPF6O94906 941 aaKnown RBP19.45■□□□□ 0.7
ABCD4-228ENST00000557588 ZDHHC11BP0C7U3 371 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 RRAGBQ5VZM2 374 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 OR6B3Q8NGW1 331 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 WBP2Q969T9 261 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 DNAJC17Q9NVM6 304 aaKnown RBP19.45■□□□□ 0.7
ABCD4-228ENST00000557588 MARK1Q9P0L2 795 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 RAXQ9Y2V3 346 aa19.45■□□□□ 0.7
ABCD4-228ENST00000557588 IDEP14735 1019 aa19.44■□□□□ 0.7
ABCD4-228ENST00000557588 SLC5A3P53794 718 aa19.44■□□□□ 0.7
ABCD4-228ENST00000557588 DNASE2BQ8WZ79 361 aa19.44■□□□□ 0.7
ABCD4-228ENST00000557588 TMX3Q96JJ7 454 aa19.44■□□□□ 0.7
ABCD4-228ENST00000557588 BBC3Q96PG8 261 aaPredicted RBP19.44■□□□□ 0.7
ABCD4-228ENST00000557588 SLC6A17Q9H1V8 727 aa19.44■□□□□ 0.7
ABCD4-228ENST00000557588 KIAA1522Q9P206 1035 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms