RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-215	ENST00000557517	APOBEC3G	Q9HC16	384 aa	Known RBP	11.22	□□□□□ -0.61
PSMC6-215	ENST00000557517	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.22	□□□□□ -0.61
PSMC6-215	ENST00000557517	ATP8B3	O60423	1300 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	E2F8	A0AVK6	867 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	SLC9A3R1	O14745	358 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	COCH	O43405	550 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	NFATC1	O95644	943 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	RET	P07949	1114 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	ADRB1	P08588	477 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	KRT13	P13646	458 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	HOXC13	P31276	330 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	PRCP	P42785	496 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	SLC5A3	P53794	718 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	SIM2	Q14190	667 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	BECN1	Q14457	450 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	PROX2	Q3B8N5	592 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	NAIF1	Q69YI7	327 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	KRT39	Q6A163	491 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	LAIR1	Q6GTX8	287 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	RHBDF2	Q6PJF5	856 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	SYT13	Q7L8C5	426 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	CCDC26	Q8TAB7	109 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	SLC2A14	Q8TDB8	520 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	CYFIP2	Q96F07	1278 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	ZFR	Q96KR1	1074 aa	Known RBP	11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	TWNK	Q96RR1	684 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	TMEM8A	Q9HCN3	771 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	RMND1	Q9NWS8	449 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	HMGXB4	Q9UGU5	601 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	GMEB2	Q9UKD1	530 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	RAB23	Q9ULC3	237 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	USP18	Q9UMW8	372 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	CPQ	Q9Y646	472 aa		11.21	□□□□□ -0.61
PSMC6-215	ENST00000557517	PKD1L2	Q7Z442	2459 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	HHLA1	C9JL84	531 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517		K7EQS6	105 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	CETN3	O15182	167 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	RNF40	O75150	1001 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	CILP	O75339	1184 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	AP1G2	O75843	785 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	ABL1	P00519	1130 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	TRIM49	P0CI25	452 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	TRIM49C	P0CI26	452 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	CCDC130	P13994	396 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	OPRD1	P41143	372 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	EIF2D	P41214	584 aa	Known RBP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	PIK3CA	P42336	1068 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	PGF	P49763	221 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	PNOC	Q13519	176 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	DHCR24	Q15392	516 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	HECTD3	Q5T447	861 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	FILIP1	Q7Z7B0	1213 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	ZNF276	Q8N554	614 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	SEMA4D	Q92854	862 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	FBXO32	Q969P5	355 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	OTUB2	Q96DC9	234 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	MED10	Q9BTT4	135 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	NT5C1A	Q9BXI3	368 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	GTPBP4	Q9BZE4	634 aa	Known RBP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	IRX2	Q9BZI1	471 aa	Predicted RBP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	IMPG2	Q9BZV3	1241 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	FBXO44	Q9H4M3	255 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	PNPLA8	Q9NP80	782 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	RAB20	Q9NX57	234 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	SMPD4	Q9NXE4	827 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	TBC1D14	Q9P2M4	693 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	EBF1	Q9UH73	591 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	CDV3	Q9UKY7	258 aa	Known RBP	11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	COQ4	Q9Y3A0	265 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	PCDHA5	Q9Y5H7	936 aa		11.2	□□□□□ -0.62
PSMC6-215	ENST00000557517	GOLGA6L4	A6NEF3	574 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	GREM1	O60565	184 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	LRP3	O75074	770 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	MBL2	P11226	248 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	MAP3K7CL	P57077	242 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	FKBP3	Q00688	224 aa	Known RBP	11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	SRSF5	Q13243	272 aa	Known RBP	11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	ORC1	Q13415	861 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	ANKRD40	Q6AI12	368 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	SCARA5	Q6ZMJ2	495 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	CLEC20A	Q6ZU45	233 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	TTC39C	Q8N584	583 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	FBXL13	Q8NEE6	735 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	TTC16	Q8NEE8	873 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	EEF2KMT	Q96G04	330 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	UBXN6	Q9BZV1	441 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	NIF3L1	Q9GZT8	377 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	CYLD	Q9NQC7	956 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	KRT82	Q9NSB4	513 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	CFAP97	Q9P2B7	532 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	SLC8A2	Q9UPR5	921 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	SCML2	Q9UQR0	700 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	USP3	Q9Y6I4	520 aa		11.19	□□□□□ -0.62
PSMC6-215	ENST00000557517	DCDC2B	A2VCK2	349 aa		11.18	□□□□□ -0.62
PSMC6-215	ENST00000557517	STX10	O60499	249 aa		11.18	□□□□□ -0.62

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