RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 HLA-DQA1Q5Y7H0 255 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 NECAB2Q7Z6G3 386 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 CLYBLQ8N0X4 340 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ZBTB9Q96C00 473 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 DDX47Q9H0S4 455 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 AP3M1Q9Y2T2 418 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 CLUHO75153 1309 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 WNT10BO00744 389 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 KITP10721 976 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 RRM2P31350 389 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 MYL6P60660 151 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 PKN2Q16513 984 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 FAM171A1Q5VUB5 890 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 C15orf52Q6ZUT6 534 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 MSL3Q8N5Y2 521 aaKnown RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 SPATA4Q8NEY3 305 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 FAM162AQ96A26 154 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 L3MBTL3Q96JM7 780 aaPredicted RBP8.64□□□□□ -1.03
CHD8-213ENST00000557364 VIPAS39Q9H9C1 493 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ABCB6Q9NP58 842 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 ASAH2Q9NR71 780 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 PYCARDQ9ULZ3 195 aa8.64□□□□□ -1.03
CHD8-213ENST00000557364 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 C1QTNF3-AMACRE9PGA6 284 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 FGF10O15520 208 aaPredicted RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 DDHD2O94830 711 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 PTK7Q13308 1070 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 KLHDC7AQ5VTJ3 777 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 USP45Q70EL2 814 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SLC30A5Q8TAD4 765 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 BLOC1S5Q8TDH9 187 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 ZNF333Q96JL9 665 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 RIOX1Q9H6W3 641 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SMYD3Q9H7B4 428 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 NEK6Q9HC98 313 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 VTI1BQ9UEU0 232 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 NPHP3-ACAD11A0A0J9YXS1 232 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 GLP2RO95838 553 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 IMPDH2P12268 514 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 INSRRP14616 1297 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 CES1P23141 567 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 GPC1P35052 558 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 MAPK9P45984 424 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 CLCN3P51790 818 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 C1QBPQ07021 282 aaKnown RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 TROAPQ12815 778 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 ALG11Q2TAA5 492 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 MIB1Q86YT6 1006 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 CCDC60Q8IWA6 550 aaPredicted RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 OTULINQ96BN8 352 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 MTMR12Q9C0I1 747 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 GPRC5DQ9NZD1 345 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SOX13Q9UN79 622 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 CCDC195A0A1B0GUA6 201 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SYNDIG1LA6NDD5 238 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 OR56A5P0C7T3 313 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 ZNF7P17097 686 aaPredicted RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 GRM3Q14832 879 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 COBLL1Q53SF7 1204 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 ICE2Q659A1 982 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 B4GALNT2Q8NHY0 566 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 ZNF669Q96BR6 464 aaPredicted RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 RMDN2Q96LZ7 410 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 TINF2Q9BSI4 451 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SYBUQ9NX95 663 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 BCL9O00512 1426 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 TK2O00142 265 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 FGFR2P21802 821 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 RUNX1T1Q06455 604 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 RASGRP2Q7LDG7 609 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 LRRC49Q8IUZ0 686 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SLC25A41Q8N5S1 370 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 USP33Q8TEY7 942 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 KLK14Q9P0G3 267 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 MGAT4DA6NG13 374 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 FKBP9O95302 570 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 PPARDQ03181 441 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 MARC1Q5VT66 337 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 FKBP9P1Q75LS8 142 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 PDCD2LQ9BRP1 358 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 COL5A2P05997 1499 aaPredicted RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 DTNBO60941 627 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 DDNO94850 711 aaPredicted RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 CXCR2P25025 360 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD8-213ENST00000557364 CYP24A1Q07973 514 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 AGBL2Q5U5Z8 902 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 CLEC17AQ6ZS10 378 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 ATXN3LQ9H3M9 355 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 CACNA2D2Q9NY47 1150 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 SCN3BQ9NY72 215 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.63□□□□□ -1.03
CHD8-213ENST00000557364 ADGRB2O60241 1585 aa8.63□□□□□ -1.03
CHD8-213ENST00000557364 TMEM131LA2VDJ0 1609 aa8.62□□□□□ -1.03
CHD8-213ENST00000557364 EIF3HO15372 352 aaKnown RBP eCLIP8.62□□□□□ -1.033e-6■■□□□ 14.2
CHD8-213ENST00000557364 CHGBP05060 677 aa8.62□□□□□ -1.03
CHD8-213ENST00000557364 EPB42P16452 691 aa8.62□□□□□ -1.03
CHD8-213ENST00000557364 PTPN11Q06124 597 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms