RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 NOB1Q9ULX3 412 aaKnown RBP5.13□□□□□ -1.59
VRK1-207ENST00000557352 FRS3O43559 492 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 U2AF1L5P0DN76 240 aaPredicted RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 ATF7P17544 494 aaPredicted RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 HOXD9P28356 352 aaPredicted RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 ITGA8P53708 1063 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 FOXG1P55316 489 aaPredicted RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 U2AF1Q01081 240 aaKnown RBP eCLIP5.12□□□□□ -1.59
VRK1-207ENST00000557352 ARHGEF7Q14155 803 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 ZNF750Q32MQ0 723 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 C3orf38Q5JPI3 329 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 DENND2CQ68D51 928 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 CHPFQ8IZ52 775 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 FAM177A1Q8N128 213 aaPredicted RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 MAFAQ8NHW3 353 aaPredicted RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 MAP4K1Q92918 833 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 CUL5Q93034 780 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 STK31Q9BXU1 1019 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 GAR1Q9NY12 217 aaKnown RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 MTMR4Q9NYA4 1195 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 AFF4Q9UHB7 1163 aaKnown RBP5.12□□□□□ -1.59
VRK1-207ENST00000557352 TPCN1Q9ULQ1 816 aa5.12□□□□□ -1.59
VRK1-207ENST00000557352 H3BNC9 293 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 AGPSO00116 658 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 EXOC5O00471 708 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 TMPRSS11DO60235 418 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 RNF8O76064 485 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 GATMP50440 423 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 PGDP52209 483 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 POLGP54098 1239 aaPredicted RBP5.11□□□□□ -1.59
VRK1-207ENST00000557352 RBMS2Q15434 407 aaKnown RBP5.11□□□□□ -1.59
VRK1-207ENST00000557352 SEC23BQ15437 767 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 CNGA2Q16280 664 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 ODR4Q5SWX8 454 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 TMEM63BQ5T3F8 832 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 DCDC5Q6ZRR9 648 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 IRF2BP2Q7Z5L9 587 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 LIX1LQ8IVB5 337 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 DHX36Q9H2U1 1008 aaKnown RBP5.11□□□□□ -1.59
VRK1-207ENST00000557352 C1orf112Q9NSG2 853 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 HDAC9Q9UKV0 1011 aa5.11□□□□□ -1.59
VRK1-207ENST00000557352 A6NNZ2 444 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 PIAS2O75928 621 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 PRF1P14222 555 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 ZKSCAN1P17029 563 aaPredicted RBP5.1□□□□□ -1.59
VRK1-207ENST00000557352 RPS16P62249 146 aaKnown RBP5.1□□□□□ -1.59
VRK1-207ENST00000557352 FMO1Q01740 532 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 MINDY4Q4G0A6 757 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 TMTC4Q5T4D3 741 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 FAM102BQ5T8I3 360 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 RANBP10Q6VN20 620 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 ZNF517Q6ZMY9 492 aaPredicted RBP5.1□□□□□ -1.59
VRK1-207ENST00000557352 SIGLEC11Q96RL6 698 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 COL20A1Q9P218 1284 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 PI4KBQ9UBF8 816 aa5.1□□□□□ -1.59
VRK1-207ENST00000557352 LY6G6EA0A0G2JKS1 128 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 PARP1P09874 1014 aaKnown RBP5.09□□□□□ -1.59
VRK1-207ENST00000557352 TMEM191BP0C7N4 346 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 IL1R1P14778 569 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 MCM5P33992 734 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 CPT1AP50416 773 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 CFHR3Q02985 330 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 ZNF91Q05481 1191 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 SLC29A2Q14542 456 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 KCNB1Q14721 858 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 TRIM71Q2Q1W2 868 aaKnown RBP5.09□□□□□ -1.59
VRK1-207ENST00000557352 METTL25Q8N6Q8 603 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 HS6ST2Q96MM7 605 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 CHST8Q9H2A9 424 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 NKX1-2Q9UD57 310 aaPredicted RBP5.09□□□□□ -1.59
VRK1-207ENST00000557352 RGS17Q9UGC6 210 aaPredicted RBP5.09□□□□□ -1.59
VRK1-207ENST00000557352 MID2Q9UJV3 735 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 ASAP1Q9ULH1 1129 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 RIMKLBQ9ULI2 386 aa5.09□□□□□ -1.59
VRK1-207ENST00000557352 RAB27BO00194 218 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 INSIG1O15503 277 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 SCGB1D2O95969 90 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 TXNP10599 105 aaKnown RBP5.08□□□□□ -1.6
VRK1-207ENST00000557352 ACVR2AP27037 513 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 THBS4P35443 961 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 HTRA4P83105 476 aaPredicted RBP5.08□□□□□ -1.6
VRK1-207ENST00000557352 DEUP1Q05D60 604 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 STK3Q13188 491 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 TWIST1Q15672 202 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 NFE2Q16621 373 aaPredicted RBP5.08□□□□□ -1.6
VRK1-207ENST00000557352 ARHGAP29Q52LW3 1261 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 VSTM1Q6UX27 236 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 C12orf76Q8N812 135 aaPredicted RBP5.08□□□□□ -1.6
VRK1-207ENST00000557352 EDC3Q96F86 508 aaKnown RBP5.08□□□□□ -1.6
VRK1-207ENST00000557352 KAZALD1Q96I82 304 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 VCPIP1Q96JH7 1222 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 FAM204AQ9H8W3 233 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 TMEM184CQ9NVA4 438 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 DKK4Q9UBT3 224 aa5.08□□□□□ -1.6
VRK1-207ENST00000557352 MYMKA6NI61 221 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 A8MVJ9 347 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 CLIC1O00299 241 aa5.07□□□□□ -1.6
VRK1-207ENST00000557352 SNHG28P0DPA3 235 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms