RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 PTPRJQ12913 1337 aa13.37□□□□□ -0.27
PSEN1-221ENST00000557293 WASH3PC4AMC7 463 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 ABL1P00519 1130 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 KRT19P08727 400 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 WARSP23381 471 aaKnown RBP13.36□□□□□ -0.27
PSEN1-221ENST00000557293 TRMT11Q7Z4G4 463 aaKnown RBP13.36□□□□□ -0.27
PSEN1-221ENST00000557293 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
PSEN1-221ENST00000557293 C1orf216Q8TAB5 229 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 HVCN1Q96D96 273 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 AK8Q96MA6 479 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 ZDHHC5Q9C0B5 715 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 WSB2Q9NYS7 404 aaPredicted RBP13.36□□□□□ -0.27
PSEN1-221ENST00000557293 SUSD2Q9UGT4 822 aa13.36□□□□□ -0.27
PSEN1-221ENST00000557293 CHORDC1Q9UHD1 332 aaPredicted RBP13.36□□□□□ -0.27
PSEN1-221ENST00000557293 CELSR3Q9NYQ7 3312 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 SHROOM3Q8TF72 1996 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 CISD3P0C7P0 127 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 ZNF883P0CG24 379 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 DDIT3P35638 169 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 UBA7P41226 1012 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 PGFP49763 221 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 MAPRE1Q15691 268 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 SNX30Q5VWJ9 437 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 TDRD10Q5VZ19 366 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 METTL3Q86U44 580 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 FOXJ1Q92949 421 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 DNAJC19Q96DA6 116 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 P2RY11Q96G91 374 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 CALML4Q96GE6 196 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 HPDLQ96IR7 371 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 ZSCAN31Q96LW9 406 aaPredicted RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 MRPL45Q9BRJ2 306 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 CBWD1Q9BRT8 395 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 INTS13Q9NVM9 706 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 FNDC3AQ9Y2H6 1198 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 RAD54BQ9Y620 910 aa13.35□□□□□ -0.27
PSEN1-221ENST00000557293 GOLGA4Q13439 2230 aaKnown RBP13.35□□□□□ -0.27
PSEN1-221ENST00000557293 A0A1B0GTW7 788 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 EIF4E1BA6NMX2 242 aaKnown RBP13.34□□□□□ -0.27
PSEN1-221ENST00000557293 KCNJ18B7U540 433 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 CLDN5O00501 218 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 TRIM66O15016 1216 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 NDUFS2O75306 463 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 CILPO75339 1184 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 LDHAP00338 332 aaKnown RBP13.34□□□□□ -0.27
PSEN1-221ENST00000557293 ZDHHC11BP0C7U3 371 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
PSEN1-221ENST00000557293 GARTP22102 1010 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 ANXA13P27216 316 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 CASP5P51878 434 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 C19orf57Q0VDD7 668 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 WDR45BQ5MNZ6 344 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 SYCP2LQ5T4T6 812 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 L1TD1Q5T7N2 865 aaKnown RBP13.34□□□□□ -0.27
PSEN1-221ENST00000557293 BTBD8Q5XKL5 378 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 DYMQ7RTS9 669 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 SETD7Q8WTS6 366 aaKnown RBP13.34□□□□□ -0.27
PSEN1-221ENST00000557293 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
PSEN1-221ENST00000557293 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 FGFBP2Q9BYJ0 223 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 ZNF518BQ9C0D4 1074 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 PCIF1Q9H4Z3 704 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 GAREM1Q9H706 876 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 CCSER2Q9H7U1 834 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 TM7SF3Q9NS93 570 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 EHD2Q9NZN4 543 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
PSEN1-221ENST00000557293 KNL1Q8NG31 2342 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 FAM149AA5PLN7 773 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-221ENST00000557293 CST3P01034 146 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-221ENST00000557293 GNSP15586 552 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 YWHAQP27348 245 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 CD6P30203 668 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-221ENST00000557293 HLA-BQ31612 363 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 ANO4Q32M45 955 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 GRAMD4Q6IC98 578 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 PAQR9Q6ZVX9 377 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 USP49Q70CQ1 688 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 HTR3DQ70Z44 454 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 CHPFQ8IZ52 775 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 SCAMP5Q8TAC9 235 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 TOE1Q96GM8 510 aaKnown RBP13.33□□□□□ -0.28
PSEN1-221ENST00000557293 SLITRK1Q96PX8 696 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 UBL7Q96S82 380 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-221ENST00000557293 KCNK16Q96T55 309 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 DPEP3Q9H4B8 488 aa13.33□□□□□ -0.28
PSEN1-221ENST00000557293 PRDM16Q9HAZ2 1276 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 522.1 ms