RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	SYNPO	Q8N3V7	929 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	LRRC71	Q8N4P6	559 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	CNNM3	Q8NE01	707 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	FNIP1	Q8TF40	1166 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	PIBF1	Q8WXW3	757 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	FAM167A	Q96KS9	214 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	TM9SF2	Q99805	663 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	CLSTN3	Q9BQT9	956 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	BRD9	Q9H8M2	597 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	RSAD1	Q9HA92	442 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZFP14	Q9HCL3	533 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZNF334	Q9HCZ1	680 aa	Predicted RBP	5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	DNMT3B	Q9UBC3	853 aa	Known RBP	5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	FBXW11	Q9UKB1	542 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	SF3B6	Q9Y3B4	125 aa	Known RBP	5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	FHOD1	Q9Y613	1164 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	APC2	O95996	2303 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	DOCK6	Q96HP0	2047 aa		5.26	□□□□□ -1.57
SCFD1-223	ENST00000557076	EVPL	Q92817	2033 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	IGKV6-21	A0A0C4DH24	114 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	SH3D21	A4FU49	640 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CYSRT1	A8MQ03	144 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076		H0Y626	953 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076		H0Y8X5	98 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	IPO5	O00410	1097 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CDX4	O14627	284 aa	Predicted RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	IFIT3	O14879	490 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CCL16	O15467	120 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	RPP40	O75818	363 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	TRIM16	O95361	564 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CAVIN2	O95810	425 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	PSMC3	P17980	439 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	NCL	P19338	710 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CCNE1	P24864	410 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	RDX	P35241	583 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	MPL	P40238	635 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	OR1G1	P47890	313 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	GNAQ	P50148	359 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	MRPL58	Q14197	206 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	LRRC32	Q14392	662 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	LIN9	Q5TKA1	542 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CYB5R4	Q7L1T6	521 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	TRMT1L	Q7Z2T5	733 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	CATIP	Q7Z7H3	387 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZNF410	Q86VK4	478 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	MCRS1	Q96EZ8	462 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	MSANTD3	Q96H12	275 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZNF668	Q96K58	619 aa	Predicted RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	SCLT1	Q96NL6	688 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	BBC3	Q96PG8	261 aa	Predicted RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	SPON2	Q9BUD6	331 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	C8orf33	Q9H7E9	229 aa	Predicted RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	TRPV4	Q9HBA0	871 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	GP6	Q9HCN6	339 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	TBC1D22B	Q9NU19	505 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	SEC63	Q9UGP8	760 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	PIN4	Q9Y237	131 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	PRG3	Q9Y2Y8	225 aa	Predicted RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	MRPS23	Q9Y3D9	190 aa	Known RBP	5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	PIAS3	Q9Y6X2	628 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	C2orf16	Q68DN1	1984 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	LOXHD1	Q8IVV2	1947 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	COL12A1	Q99715	3063 aa		5.25	□□□□□ -1.57
SCFD1-223	ENST00000557076	SALL3	Q9BXA9	1300 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076		A0A087WZ62	844 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ERICH2	A1L162	156 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	BCLAF3	A2AJT9	711 aa	Known RBP	5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ARL5C	A6NH57	179 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076		K7ESM1	405 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ARNTL	O00327	626 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZNF197	O14709	1029 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZNF263	O14978	683 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	PRICKLE3	O43900	615 aa	Predicted RBP	5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	RHOBTB1	O94844	696 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	PLA2G1B	P04054	148 aa	Known RBP	5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	RHO	P08100	348 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	CYP3A4	P08684	503 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ITGA4	P13612	1032 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	PTPN2	P17706	415 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	RPL17	P18621	184 aa	Known RBP	5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	SDS	P20132	328 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	FCAR	P24071	287 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	L1CAM	P32004	1257 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	PDE1A	P54750	535 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	ZNF445	P59923	1031 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	POU4F1	Q01851	419 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	SPIRE1	Q08AE8	756 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	TRDN	Q13061	729 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	RAB33A	Q14088	237 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	SART3	Q15020	963 aa	Known RBP	5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	UBE2S	Q16763	222 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	COL28A1	Q2UY09	1125 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	PLK5	Q496M5	336 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	FAM78A	Q5JUQ0	283 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	NT5DC1	Q5TFE4	455 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	FUT10	Q6P4F1	479 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	PDXDC1	Q6P996	788 aa		5.24	□□□□□ -1.57
SCFD1-223	ENST00000557076	CATSPER4	Q7RTX7	472 aa		5.24	□□□□□ -1.57

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