RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 MAGED2Q9UNF1 606 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 TIMM13Q9Y5L4 95 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-245ENST00000556958 SNX11Q9Y5W9 270 aa6.2□□□□□ -1.42
ATXN3-245ENST00000556958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 A0A1W2PQF6 199 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 H0Y8X5 98 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 YKT6O15498 198 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 SPINT1O43278 529 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 GJB6O95452 261 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 MT-CO3P00414 261 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 HAPLN1P10915 354 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 HMGA1P17096 107 aaKnown RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 CKMT2P17540 419 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ATF6P18850 670 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 LIG1P18858 919 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 HDCP19113 662 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ABCB4P21439 1286 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 TNFRSF8P28908 595 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 RBMS1P29558 406 aaKnown RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 TNFSF9P41273 254 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 GRIA4P48058 902 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 EFNA5P52803 228 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 DNAJC3Q13217 504 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 KCNB1Q14721 858 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 NCAPHQ15003 741 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 TSGA10IPQ3SY00 556 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 LINC00303Q3SY05 128 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 SLC39A12Q504Y0 691 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 OXLD1Q5BKU9 147 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ATF7IP2Q5U623 682 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 EEF1DP3Q658K8 133 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 MOXD1Q6UVY6 613 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 KDM7AQ6ZMT4 941 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 USP53Q70EK8 1073 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 DHX32Q7L7V1 743 aaKnown RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ADAT2Q7Z6V5 191 aaKnown RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 THEM5Q8N1Q8 247 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 TTC9BQ8N6N2 239 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 PLPP7Q8NBV4 271 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 MCPH1Q8NEM0 835 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 CCDC148Q8NFR7 591 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 DEPTORQ8TB45 409 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ETNPPLQ8TBG4 499 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 TBCKQ8TEA7 893 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 RUFY2Q8WXA3 655 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 VCPIP1Q96JH7 1222 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 MRGPRX1Q96LB2 322 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 CCNL2Q96S94 520 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 SLC25A18Q9H1K4 315 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 POLR1BQ9H9Y6 1135 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ZDHHC4Q9NPG8 344 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ITM2CQ9NQX7 267 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 TMPRSS4Q9NRS4 437 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 WRAP73Q9P2S5 460 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-245ENST00000556958 DEC1Q9P2X7 70 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 ARHGAP26Q9UNA1 814 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 STARD13Q9Y3M8 1113 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 PCDHB11Q9Y5F2 797 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 STK36Q9NRP7 1315 aa6.19□□□□□ -1.42
ATXN3-245ENST00000556958 THADAQ6YHU6 1953 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 RELNP78509 3460 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 A0A1B0GTQ1 180 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 CCDC196A0A1B0GTZ2 297 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 BTBD18B2RXH4 712 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 GFRA2O00451 464 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 KCNK3O14649 394 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 ZBTB39O15060 712 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 LYPLA2O95372 231 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 CYP17A1P05093 508 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 MPOP05164 745 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 ADH5P11766 374 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 XRCC6P12956 609 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 PFKLP17858 780 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 ITGB7P26010 798 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 WASP42768 502 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 ZNF132P52740 706 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 C21orf59P57076 290 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 NLRP5P59047 1200 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 GABREP78334 506 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 AKAP17AQ02040 695 aaKnown RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 GAD2Q05329 585 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 GRIN1Q05586 938 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 CTTNQ14247 550 aaKnown RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 STARD3Q14849 445 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 PPP2R5AQ15172 486 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 IGFBP7Q16270 282 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 GAB4Q2WGN9 574 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 C10orf76Q5T2E6 689 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 HIST2H2BCQ6DN03 193 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 RHBDF2Q6PJF5 856 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 METTL23Q86XA0 190 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 SFTPA1Q8IWL2 248 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 HOMEZQ8IX15 550 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 DCP1BQ8IZD4 617 aaKnown RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 ARL14EPQ8N8R7 260 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 C1orf216Q8TAB5 229 aa6.18□□□□□ -1.42
ATXN3-245ENST00000556958 C18orf25Q96B23 403 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-245ENST00000556958 MOCOSQ96EN8 888 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms