RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SCN4BQ8IWT1 228 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 ATAD1Q8NBU5 361 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 PBKQ96KB5 322 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 CNPY3Q9BT09 278 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 TLR9Q9NR96 1032 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 FNIP2Q9P278 1114 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 HSFX1Q9UBD0 423 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 USP3Q9Y6I4 520 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 KCNK3O14649 394 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 TNFRSF10BO14763 440 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 ADAM12O43184 909 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 PSTPIP1O43586 416 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 DAB1O75553 588 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 GRAP2O75791 330 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 CTSAP10619 480 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 PDGFRAP16234 1089 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 NDUFV1P49821 464 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 DNA2P51530 1060 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 SLC5A3P53794 718 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 PM20D1Q6GTS8 502 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 RXFP2Q8WXD0 754 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 CEP295NLQ96MC4 621 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 PSMB7Q99436 277 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 CARD9Q9H257 536 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 AFF4Q9UHB7 1163 aaKnown RBP24.86■■□□□ 1.57
SIX4-203ENST00000556952 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.86■■□□□ 1.57
SIX4-203ENST00000556952 PCDHA3Q9Y5H8 950 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 GREB1Q4ZG55 1949 aa24.86■■□□□ 1.57
SIX4-203ENST00000556952 SRGAP2O75044 1071 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 VNN2O95498 520 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 HAPLN1P10915 354 aaPredicted RBP24.85■■□□□ 1.57
SIX4-203ENST00000556952 RPL17P18621 184 aaKnown RBP24.85■■□□□ 1.57
SIX4-203ENST00000556952 SDC4P31431 198 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 TAF5Q15542 800 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 CCDC85BQ15834 202 aaPredicted RBP24.85■■□□□ 1.57
SIX4-203ENST00000556952 CPNE8Q86YQ8 564 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 RHOT1Q8IXI2 618 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 PPM1EQ8WY54 764 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 FAM149B1Q96BN6 582 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 NCAPGQ9BPX3 1015 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 TRIM62Q9BVG3 475 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 RNF14Q9UBS8 474 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 USTQ9Y2C2 406 aa24.85■■□□□ 1.57
SIX4-203ENST00000556952 FSCN2O14926 492 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 RNF8O76064 485 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 CXCR5P32302 372 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 PTPN9P43378 593 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 RPL10AP62906 217 aaKnown RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 YWHAZP63104 245 aaKnown RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 RAB33AQ14088 237 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 MGAT5BQ3V5L5 792 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 TRNP1Q6NT89 227 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 CC2D1AQ6P1N0 951 aaPredicted RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 MAFAQ8NHW3 353 aaPredicted RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 ZNF461Q8TAF7 563 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 SPATA17Q96L03 361 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 RXFP1Q9HBX9 757 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 RIOK3O14730 519 aaKnown RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 LILRB3O75022 631 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 ABLIM3O94929 683 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 USP17L7P0C7H9 530 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 PEX5P50542 639 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 CKAP4Q07065 602 aaKnown RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 LRRC38Q5VT99 294 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 PLPP4Q5VZY2 271 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 NUP93Q8N1F7 819 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 COG1Q8WTW3 980 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 KRT35Q92764 455 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 GOLGA1Q92805 767 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 SLC2A13Q96QE2 648 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 SEPT5Q99719 369 aaPredicted RBP24.84■■□□□ 1.57
SIX4-203ENST00000556952 TCF25Q9BQ70 676 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 FBXO44Q9H4M3 255 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 POPDC2Q9HBU9 364 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.84■■□□□ 1.57
SIX4-203ENST00000556952 MAFFQ9ULX9 164 aa24.84■■□□□ 1.57
SIX4-203ENST00000556952 XIRP2A4UGR9 3374 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 BRWD1Q9NSI6 2320 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 LRCH4O75427 683 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 PCK1P35558 622 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 MATKP42679 507 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 TUFMP49411 452 aaKnown RBP24.83■■□□□ 1.57
SIX4-203ENST00000556952 RWDD2BP57060 319 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 DUSP4Q13115 394 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 CCDC14Q49A88 953 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 BHLHA9Q7RTU4 235 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 ADGRD2Q7Z7M1 963 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 TTC9BQ8N6N2 239 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 CEP112Q8N8E3 955 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 AUTS2Q8WXX7 1259 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 CFAP57Q96MR6 1250 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 DDX23Q9BUQ8 820 aaKnown RBP24.83■■□□□ 1.57
SIX4-203ENST00000556952 CRISPLD1Q9H336 500 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 ENTPD7Q9NQZ7 604 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 COMMD8Q9NX08 183 aa24.83■■□□□ 1.57
SIX4-203ENST00000556952 ZNF638Q14966 1978 aaKnown RBP24.82■■□□□ 1.56
SIX4-203ENST00000556952 ZNF185O15231 689 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 LTFP02788 710 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 ATF2P15336 505 aa24.82■■□□□ 1.56
SIX4-203ENST00000556952 NOS2P35228 1153 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms