RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 ITGAVP06756 1048 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 CKMT2P17540 419 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 LSSP48449 732 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 SKOR1P84550 965 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 FOXK1P85037 733 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 SHBQ15464 509 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 NFE2Q16621 373 aaPredicted RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 C9orf57Q5W0N0 161 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 WSCD1Q658N2 575 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 OTUB2Q96DC9 234 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 MMS19Q96T76 1030 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ELF4Q99607 663 aaPredicted RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 C6orf106Q9H6K1 298 aaPredicted RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ABCB6Q9NP58 842 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 THSD1Q9NS62 852 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 SMPD4Q9NXE4 827 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 PLEKHB1Q9UF11 243 aaPredicted RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 TLN1Q9Y490 2541 aaKnown RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 SCN1AP35498 2009 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ITPR3Q14573 2671 aa13.05□□□□□ -0.32
CNOT10-219ENST00000556853 SPTBN1Q01082 2364 aaKnown RBP13.05□□□□□ -0.32
CNOT10-219ENST00000556853 ITPR2Q14571 2701 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 ARHGEF35A5YM69 484 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 CCDC169A6NNP5 214 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 MED24O75448 989 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 TOM1L1O75674 476 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 CLTAP09496 248 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 SFTPCP11686 197 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 ABCB4P21439 1286 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 NPTX2P47972 431 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 ST3GAL1Q11201 340 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 PRAMEF14Q5SWL7 426 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 TMPRSS6Q8IU80 811 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
CNOT10-219ENST00000556853 SIPA1Q96FS4 1042 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
CNOT10-219ENST00000556853 ARHGAP9Q9BRR9 750 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
CNOT10-219ENST00000556853 POLR1BQ9H9Y6 1135 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 TUFT1Q9NNX1 390 aa13.04□□□□□ -0.32
CNOT10-219ENST00000556853 IGHDP01880 384 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 PEX3P56589 373 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 E2F1Q01094 437 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 TSPY1Q01534 308 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 IGFBP7Q16270 282 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 ANO4Q32M45 955 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 ADAT2Q7Z6V5 191 aaKnown RBP13.03□□□□□ -0.32
CNOT10-219ENST00000556853 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
CNOT10-219ENST00000556853 TMEM25Q86YD3 366 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 EXTL1Q92935 676 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 BRF1Q92994 677 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 AIFM3Q96NN9 605 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 SPHK2Q9NRA0 654 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 STON1Q9Y6Q2 735 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 TCHHQ07283 1943 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 NUMA1Q14980 2115 aa13.03□□□□□ -0.32
CNOT10-219ENST00000556853 EFSO43281 561 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
CNOT10-219ENST00000556853 ADRB2P07550 413 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 ACP1P24666 158 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 AFMP43652 599 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 ZNF132P52740 706 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 INHBCP55103 352 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 GRIN1Q05586 938 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 MCL1Q07820 350 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 STARD3Q14849 445 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 RNF20Q5VTR2 975 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 IGF2-ASQ6U949 168 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 PRCCQ92733 491 aaPredicted RBP13.02□□□□□ -0.33
CNOT10-219ENST00000556853 BIRC7Q96CA5 298 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.33
CNOT10-219ENST00000556853 ORAI3Q9BRQ5 295 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 CCSER1Q9C0I3 900 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 HAPLN2Q9GZV7 340 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 DNAJC17Q9NVM6 304 aaKnown RBP13.02□□□□□ -0.33
CNOT10-219ENST00000556853 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
CNOT10-219ENST00000556853 ARID1BQ8NFD5 2236 aaPredicted RBP13.02□□□□□ -0.33
CNOT10-219ENST00000556853 ZNF840PA6NDX5 716 aa13.01□□□□□ -0.33
CNOT10-219ENST00000556853 VILLO15195 856 aa13.01□□□□□ -0.33
CNOT10-219ENST00000556853 USP12O75317 370 aa13.01□□□□□ -0.33
CNOT10-219ENST00000556853 DEXIO95424 95 aa13.01□□□□□ -0.33
CNOT10-219ENST00000556853 ITGB2P05107 769 aa13.01□□□□□ -0.33
CNOT10-219ENST00000556853 ACADMP11310 421 aa13.01□□□□□ -0.33
CNOT10-219ENST00000556853 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms