RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
LINC01550-206ENST00000556462 HERVK_113Q902F9 699 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
LINC01550-206ENST00000556462 ACSF2Q96CM8 615 aaPredicted RBP11.33□□□□□ -0.6
LINC01550-206ENST00000556462 TMEM169Q96HH4 297 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 C8orf48Q96LL4 319 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 ZWILCHQ9H900 591 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
LINC01550-206ENST00000556462 KLHL11Q9NVR0 708 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 DDX56Q9NY93 547 aaKnown RBP11.33□□□□□ -0.6
LINC01550-206ENST00000556462 SPG21Q9NZD8 308 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 CDY1Q9Y6F8 540 aa11.33□□□□□ -0.6
LINC01550-206ENST00000556462 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 PI4K2BG5E9Z4 385 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 CCDC188H7C350 402 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 DAB1O75553 588 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 ENDOD1O94919 500 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 RALAP11233 206 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 GPR15P49685 360 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 PITX1P78337 314 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 MRPS25P82663 173 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 DSG1Q02413 1049 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SMARCB1Q12824 385 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 KLF1Q13351 362 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 OTUD1Q5VV17 481 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 MFSD7Q6UXD7 560 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SCN4BQ8IWT1 228 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 PRELID2Q8N945 189 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 HDAC7Q8WUI4 952 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 IRGQQ8WZA9 623 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SLITRK1Q96PX8 696 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 TBCBQ99426 244 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 KRT12Q99456 494 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 NPY6RQ99463 290 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 CLSTN3Q9BQT9 956 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 PARD6BQ9BYG5 372 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 OSBPL8Q9BZF1 889 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 ZMYND8Q9ULU4 1186 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 NAALADL1Q9UQQ1 740 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SLC27A5Q9Y2P5 690 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 INSL6Q9Y581 213 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 WDR27A2RRH5 827 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 C2CD2LO14523 706 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 LTFP02788 710 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 KRT1P04264 644 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 OR1D2P34982 312 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 CDKN2BP42772 138 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 ROR1Q01973 937 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 ADCY2Q08462 1091 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 PSMD5Q16401 504 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 SDHAF4Q5VUM1 108 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 STRADAQ7RTN6 431 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 CCDC50Q8IVM0 306 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 KLHL7Q8IXQ5 586 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 ANKRD7Q92527 254 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 CLP1Q92989 425 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 RBM41Q96IZ5 413 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 PNKPQ96T60 521 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 HEMGNQ9BXL5 484 aa11.32□□□□□ -0.6
LINC01550-206ENST00000556462 DDX47Q9H0S4 455 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
LINC01550-206ENST00000556462 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 TRIM66O15016 1216 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 PRPSAP2O60256 369 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 SOAT2O75908 522 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 CD48P09326 243 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 KDELR1P24390 212 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 ARSEP51690 589 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 COPS2P61201 443 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 DUSP4Q13115 394 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
LINC01550-206ENST00000556462 TAZQ16635 292 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 BOLA3Q53S33 107 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 ZFYVE27Q5T4F4 411 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 SCYL2Q6P3W7 929 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 SPOCD1Q6ZMY3 1216 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 HERC6Q8IVU3 1022 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 NUP93Q8N1F7 819 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 FIBCD1Q8N539 461 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 STKLD1Q8NE28 680 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 RAD9AQ99638 391 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 NCAPGQ9BPX3 1015 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 ZBED2Q9BTP6 218 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 HTATIP2Q9BUP3 242 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 HERC2P3Q9BVR0 1158 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 IL37Q9NZH6 218 aa11.31□□□□□ -0.6
LINC01550-206ENST00000556462 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
LINC01550-206ENST00000556462 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms