RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CCDC172P0C7W6 258 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 EPB41P11171 864 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 FCER1AP12319 257 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 KLK7P49862 253 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 DNA2P51530 1060 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 FKBP1BP68106 108 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 SREBF2Q12772 1141 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 STK4Q13043 487 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 TRAF1Q13077 416 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PICALMQ13492 652 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 HLTFQ14527 1009 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PDIA5Q14554 519 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 CRY2Q49AN0 593 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 TMEM119Q4V9L6 283 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 MIIPQ5JXC2 388 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 NFRKBQ6P4R8 1299 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 WDR59Q6PJI9 974 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 CCNI2Q6ZMN8 369 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 Q7L0L9 218 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 MAATS1Q7Z4T9 603 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 SPRED1Q7Z699 444 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 GPBP1Q86WP2 473 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 SYCE1Q8N0S2 351 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 DEFB123Q8N688 67 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 SLC44A5Q8NCS7 719 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 BCAS4Q8TDM0 211 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 ZNF384Q8TF68 577 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 AENQ8WTP8 325 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 LMBR1Q8WVP7 490 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 LRRC45Q96CN5 670 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 CDCA5Q96FF9 252 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 CEP95Q96GE4 821 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 RBM17Q96I25 401 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PIGSQ96S52 555 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 PSMB7Q99436 277 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 RTFDC1Q9BY42 306 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 VPS11Q9H270 941 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 R3HDMLQ9H3Y0 253 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 MLXIPQ9HAP2 919 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 IL17RBQ9NRM6 502 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 SIK3Q9Y2K2 1263 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 ATP6V0A2Q9Y487 856 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 BZW2Q9Y6E2 419 aaKnown RBP4.74□□□□□ -1.65
ATXN3-241ENST00000556374 OTOFQ9HC10 1997 aa4.74□□□□□ -1.65
ATXN3-241ENST00000556374 A0A087WUV0 522 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 GOLGA6L7A0A1B0GV03 622 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 MYMKA6NI61 221 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TMCO5BA8MYB1 307 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CCDC188H7C350 402 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SMIM22K7EJ46 135 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PGRMC1O00264 195 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 MPHOSPH10O00566 681 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 ZNF185O15231 689 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 EIF3HO15372 352 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 BUB1O43683 1085 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CYTH3O43739 400 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SHOX2O60902 331 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PALMO75781 387 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TDP2O95551 362 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SYF2O95926 243 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 AFPP02771 609 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PLA2G4BP0C869 781 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PDHBP11177 359 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 NR1D1P20393 614 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SLC1A4P43007 532 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TM4SF4P48230 202 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CCT5P48643 541 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 POLR2FP61218 127 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 GUCY2DQ02846 1103 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 GFPT1Q06210 699 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 DBPQ10586 325 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 IKQ13123 557 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TOP3AQ13472 1001 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CUL1Q13616 776 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 NFYCQ13952 458 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PRKD1Q15139 912 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 RPS6KA1Q15418 735 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SLC18A3Q16572 532 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 EDRF1Q3B7T1 1238 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 HERC4Q5GLZ8 1057 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 DCAF17Q5H9S7 520 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 MFSD14BQ5SR56 506 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 LRRC31Q6UY01 552 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 TADA2BQ86TJ2 420 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 HOOK3Q86VS8 718 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 NELFCDQ8IXH7 590 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 Q8N1X5 172 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CCDC26Q8TAB7 109 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 SMCR8Q8TEV9 937 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 IFT81Q8WYA0 676 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PTPRN2Q92932 1015 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 DCPSQ96C86 337 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 PBKQ96KB5 322 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 CCDC43Q96MW1 224 aaKnown RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 GDAP1L1Q96MZ0 367 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 LMF1Q96S06 567 aa4.73□□□□□ -1.65
ATXN3-241ENST00000556374 NAP1L3Q99457 506 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-241ENST00000556374 MXD3Q9BW11 206 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms