RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 CMASQ8NFW8 434 aaPredicted RBP19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 FAM76AQ8TAV0 307 aa19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 HAUS1Q96CS2 278 aa19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 SMARCD1Q96GM5 515 aa19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 RAB17Q9H0T7 212 aa19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 SNX24Q9Y343 169 aa19.51■□□□□ 0.71
SDR39U1-218ENST00000556262 TMEM189-UBE2V1I3L0A0 370 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 NRP1O14786 923 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 TADA2AO75478 443 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 TJP3O95049 919 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 OR4Q2P0C623 313 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 PTPN7P35236 360 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 SCNN1AP37088 669 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 DYNLT1P63172 113 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 EFHC1Q5JVL4 640 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 C11orf84Q9BUA3 381 aaPredicted RBP19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 ULBP1Q9BZM6 244 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 GPATCH2LQ9NWQ4 482 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 GOLGA6CA6NDK9 693 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 A6NNZ2 444 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 HHLA1C9JL84 531 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 GOLGA6DP0CG33 693 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 PBX3P40426 434 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 TUBB8Q3ZCM7 444 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 HFE2Q6ZVN8 426 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 DEFB106AQ8N104 65 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 CALN1Q9BXU9 219 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 GOLGA6AQ9NYA3 693 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 RASAL2Q9UJF2 1139 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 TBX21Q9UL17 535 aa19.5■□□□□ 0.71
SDR39U1-218ENST00000556262 VWA8A3KMH1 1905 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 MICAL3Q7RTP6 2002 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 ARHGEF37A1IGU5 675 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 ECEL1O95672 775 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 PTPN9P43378 593 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 TSPY1Q01534 308 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 CCNG2Q16589 344 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 ZC3H12AQ5D1E8 599 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 ARCQ7LC44 396 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 NPAS4Q8IUM7 802 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 PAWRQ96IZ0 340 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 B3GALT6Q96L58 329 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 CCDC114Q96M63 670 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 TBCBQ99426 244 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 DDX23Q9BUQ8 820 aaKnown RBP19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 TMEM39AQ9NV64 488 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 SAE1Q9UBE0 346 aaPredicted RBP19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 NLRC5Q86WI3 1866 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 PTPRDP23468 1912 aa19.49■□□□□ 0.71
SDR39U1-218ENST00000556262 TBKBP1A7MCY6 615 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 NT5C1B-RDH14C9J2C7 533 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 CAPN15O75808 1086 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 UPP2O95045 317 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 USP17L7P0C7H9 530 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 MATKP42679 507 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 RPL21P46778 160 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 CDH6P55285 790 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 YWHAZP63104 245 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 PITX1P78337 314 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 MMRN1Q13201 1228 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 PPP1R7Q15435 360 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 TAZQ16635 292 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 DCAF6Q58WW2 860 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 RAB41Q5JT25 222 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 C1orf53Q5VUE5 145 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 TSEN2Q8NCE0 465 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 CENPIQ92674 756 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 VWCEQ96DN2 955 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 RUNDC3BQ96NL0 473 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 CSNK1G1Q9HCP0 422 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 FAM114A2Q9NRY5 505 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 DNPEPQ9ULA0 475 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 FNDC1Q4ZHG4 1894 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 YJEFN3A6XGL0 299 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 E7ENQ6 273 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 SHOX2O60902 331 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 HSPA8P11142 646 aaKnown RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 GJA8P48165 433 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 SLC11A1P49279 550 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 C1QTNF8P60827 252 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 KRT17Q04695 432 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 TRIP13Q15645 432 aaPredicted RBP19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 CEP57Q86XR8 500 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 ARMC5Q96C12 935 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 GPR62Q9BZJ7 368 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 HOMER3Q9NSC5 361 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 ADAM28Q9UKQ2 775 aa19.48■□□□□ 0.71
SDR39U1-218ENST00000556262 TRAPPC3O43617 180 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 LIASO43766 372 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 CST8O60676 142 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 ALDH2P05091 517 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 DESP17661 470 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 DAOAP59103 153 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 CA9Q16790 459 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 LRRC26Q2I0M4 334 aa19.47■□□□□ 0.71
SDR39U1-218ENST00000556262 SYPL2Q5VXT5 272 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms