RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 STILQ15468 1287 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 SCD5Q86SK9 330 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 DDX42Q86XP3 938 aaKnown RBP eCLIP15.99■□□□□ 0.15
ACTN1-217ENST00000556203 SECISBP2LQ93073 1101 aaKnown RBP15.99■□□□□ 0.15
ACTN1-217ENST00000556203 NELL2Q99435 816 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 OSBPL6Q9BZF3 934 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 LRRC4Q9HBW1 653 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 DLGAP2Q9P1A6 1054 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 NAGPAQ9UK23 515 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 DNAJC12Q9UKB3 198 aa15.99■□□□□ 0.15
ACTN1-217ENST00000556203 OTOL1A6NHN0 477 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 BECN2A8MW95 431 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 SCAMP3O14828 347 aaKnown RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 TPM2P07951 284 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 RARGP13631 454 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ADIGQ0VDE8 80 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 KCNMA1Q12791 1236 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 NCAPHQ15003 741 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ANO6Q4KMQ2 910 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 DPY19L2P1Q6NXN4 242 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 C1orf228Q6PIY5 440 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 TXNDC11Q6PKC3 985 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 RALGPS2Q86X27 583 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 DTWD2Q8NBA8 298 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 SHC3Q92529 594 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ATP2A3Q93084 1043 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ZFRQ96KR1 1074 aaKnown RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 LSM14BQ9BX40 385 aaKnown RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ULBP1Q9BZM6 244 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 NAT10Q9H0A0 1025 aaKnown RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 VPS16Q9H269 839 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 LINC00597Q9H2U6 94 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ACP6Q9NPH0 428 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 NUDT5Q9UKK9 219 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 ARIH1Q9Y4X5 557 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-217ENST00000556203 DENND4CQ5VZ89 1909 aa15.98■□□□□ 0.15
ACTN1-217ENST00000556203 COL4A2P08572 1712 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 MDM4O15151 490 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 NCAM2O15394 837 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 MED7O43513 233 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 LETM1O95202 739 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ZBED1O96006 694 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 RALAP11233 206 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 GNA15P30679 374 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ATP5C1P36542 298 aaKnown RBP15.97■□□□□ 0.15
ACTN1-217ENST00000556203 PSEN1P49768 467 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 RGS7P49802 495 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 YWHAGP61981 247 aaKnown RBP eCLIP15.97■□□□□ 0.15
ACTN1-217ENST00000556203 TCF15Q12870 199 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 EML3Q32P44 896 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 PM20D1Q6GTS8 502 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 PMF1Q6P1K2 205 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 TADA2BQ86TJ2 420 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ZNF687Q8N1G0 1237 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 SIX6OS1Q8N1H7 587 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ARHGAP18Q8N392 663 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 CPA6Q8N4T0 437 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 AOPEPQ8N6M6 819 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 KIAA1958Q8N8K9 716 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 SLC35F5Q8WV83 523 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 KCTD13Q8WZ19 329 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 NDRG1Q92597 394 aaKnown RBP15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ECT2Q9H8V3 914 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 CLIC5Q9NZA1 410 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 SH3BP1Q9Y3L3 701 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 ZNF318Q5VUA4 2279 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 KMT2EQ8IZD2 1858 aa15.97■□□□□ 0.15
ACTN1-217ENST00000556203 THAP12O43422 761 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 IRF1P10914 325 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 LCP1P13796 627 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 ZNF18P17022 549 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 PTMSP20962 102 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 CDK11BP21127 795 aaKnown RBP15.96■□□□□ 0.15
ACTN1-217ENST00000556203 PTPN5P54829 565 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 FZD5Q13467 585 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 RAPGEF1Q13905 1077 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 PON2Q15165 354 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 C10orf120Q5SQS8 335 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 FKBP15Q5T1M5 1219 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 KLHDC7AQ5VTJ3 777 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 DENND1BQ6P3S1 775 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 KLHDC10Q6PID8 442 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 ZNF606Q8WXB4 792 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 CLDN23Q96B33 292 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 KLF16Q9BXK1 252 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-217ENST00000556203 HSD3B7Q9H2F3 369 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 LIMA1Q9UHB6 759 aaKnown RBP15.96■□□□□ 0.15
ACTN1-217ENST00000556203 DNMT3LQ9UJW3 386 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 FHOD1Q9Y613 1164 aa15.96■□□□□ 0.15
ACTN1-217ENST00000556203 PATJQ8NI35 1801 aa15.96■□□□□ 0.14
ACTN1-217ENST00000556203 ANAPC1Q9H1A4 1944 aa15.96■□□□□ 0.14
ACTN1-217ENST00000556203 E2F8A0AVK6 867 aa15.95■□□□□ 0.14
ACTN1-217ENST00000556203 SYCE3A1L190 88 aa15.95■□□□□ 0.14
ACTN1-217ENST00000556203 FOXN3O00409 490 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-217ENST00000556203 PIK3R2O00459 728 aa15.95■□□□□ 0.14
ACTN1-217ENST00000556203 SLC9A3R1O14745 358 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms