RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 RBBP8NLQ8NC74 664 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-214ENST00000555867 KREMEN2Q8NCW0 462 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 VN1R2Q8NFZ6 395 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 FAM76AQ8TAV0 307 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 GRK7Q8WTQ7 553 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 AFG1LQ8WV93 481 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 CD101Q93033 1021 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 PCDHB18PQ96TA0 734 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 ADPGKQ9BRR6 497 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 C11orf84Q9BUA3 381 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-214ENST00000555867 MIS12Q9H081 205 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 TSPYL1Q9H0U9 437 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 LMAN2LQ9H0V9 348 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 ASB7Q9H672 318 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 RPF1Q9H9Y2 349 aaKnown RBP6.85□□□□□ -1.31
PSEN1-214ENST00000555867 SMARCAL1Q9NZC9 954 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 CWC15Q9P013 229 aaKnown RBP6.85□□□□□ -1.31
PSEN1-214ENST00000555867 MTRF1LQ9UGC7 380 aaKnown RBP6.85□□□□□ -1.31
PSEN1-214ENST00000555867 PCYOX1Q9UHG3 505 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 NFU1Q9UMS0 254 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 PCDHB4Q9Y5E5 795 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 ASXL3Q9C0F0 2248 aa6.85□□□□□ -1.31
PSEN1-214ENST00000555867 GOLGA6CA6NDK9 693 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 RRN3P2A6NIE6 340 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ZBTB42B2RXF5 422 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 INO80B-WBP1J3KQ70 363 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ABLIM1O14639 778 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 FAM189A1O60320 539 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 C22orf31O95567 290 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 STAU1O95793 577 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 LMNAP02545 664 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 LGALS2P05162 132 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ITGB1P05556 798 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 IVLP07476 585 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 MMP3P08254 477 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PAEPP09466 180 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 FBXO45P0C2W1 286 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 GOLGA6DP0CG33 693 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ATF7P17544 494 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ACO1P21399 889 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 COMTP21964 271 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 EIF4BP23588 611 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 MARK3P27448 753 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 POLR2BP30876 1174 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 NRIP1P48552 1158 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CARSP49589 748 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PEX5P50542 639 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CDR1P51861 262 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ZNF132P52740 706 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 NOMO3P69849 1222 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 MBTD1Q05BQ5 628 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ARHGAP1Q07960 439 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PTK7Q13308 1070 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ZNF699Q32M78 642 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 DCAF4L1Q3SXM0 396 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CWF19L1Q69YN2 538 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PLEKHA7Q6IQ23 1121 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 TMEM270Q6UE05 265 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 RUFY4Q6ZNE9 571 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 FIBCD1Q8N539 461 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ARFGAP2Q8N6H7 521 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 UBR7Q8N806 425 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 TMEM35BQ8NCS4 154 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 HDAC7Q8WUI4 952 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CASKIN2Q8WXE0 1202 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 IFT81Q8WYA0 676 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 SLCO2A1Q92959 643 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CLP1Q92989 425 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ZBTB45Q96K62 511 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 TSPAN18Q96SJ8 248 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 FMO2Q99518 471 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ERP44Q9BS26 406 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 INO80BQ9C086 356 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 DNAI2Q9GZS0 605 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 HAPLN2Q9GZV7 340 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 DDX47Q9H0S4 455 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 GOLPH3Q9H4A6 298 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 FAM204AQ9H8W3 233 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 VRTNQ9H8Y1 702 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CYP3A43Q9HB55 503 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 RC3H2Q9HBD1 1191 aaKnown RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PTPRHQ9HD43 1115 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PARVAQ9NVD7 372 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 GOLGA6AQ9NYA3 693 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.84□□□□□ -1.31
PSEN1-214ENST00000555867 WDR35Q9P2L0 1181 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 IP6K2Q9UHH9 426 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 CDH22Q9UJ99 828 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 ANAPC7Q9UJX3 599 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 FAN1Q9Y2M0 1017 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 TELO2Q9Y4R8 837 aa6.84□□□□□ -1.31
PSEN1-214ENST00000555867 PTPRJQ12913 1337 aa6.83□□□□□ -1.32
PSEN1-214ENST00000555867 TRIP11Q15643 1979 aa6.83□□□□□ -1.32
PSEN1-214ENST00000555867 SRRM3A6NNA2 597 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-214ENST00000555867 HMGB1P1B2RPK0 211 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-214ENST00000555867 SHISA8B8ZZ34 492 aa6.83□□□□□ -1.32
PSEN1-214ENST00000555867 FSCN2O14926 492 aa6.83□□□□□ -1.32
PSEN1-214ENST00000555867 PER2O15055 1255 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms