RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 RGL4Q8IZJ4 473 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 SPRYD3Q8NCJ5 442 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 ANKRD36BP1Q96IX9 119 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 SLITRK1Q96PX8 696 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 EHD2Q9NZN4 543 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 CHORDC1Q9UHD1 332 aaPredicted RBP20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 RAXQ9Y2V3 346 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 PCDHB9Q9Y5E1 797 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 RAD54BQ9Y620 910 aa20.18■□□□□ 0.82
SUPT16H-203ENST00000555752 PTPRBP23467 1997 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 A0A1W2PQD8 194 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 GJB2P29033 226 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 TRMT11Q7Z4G4 463 aaKnown RBP20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 CBWD2Q8IUF1 395 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 IPO4Q8TEX9 1081 aaKnown RBP20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 TRIM9Q9C026 710 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 CCSER2Q9H7U1 834 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 SPHK2Q9NRA0 654 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 SEL1LQ9UBV2 794 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 KIF3AQ9Y496 699 aa20.17■□□□□ 0.82
SUPT16H-203ENST00000555752 PRPF6O94906 941 aaKnown RBP20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 TNNC2P02585 160 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 IRF1P10914 325 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 PTPN1P18031 435 aaKnown RBP20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 YWHAQP27348 245 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 SLC14A1Q13336 389 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 SF3A1Q15459 793 aaKnown RBP20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 MARCH9Q86YJ5 346 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 CHPFQ8IZ52 775 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 GPD1LQ8N335 351 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 OR6B3Q8NGW1 331 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 SCAMP5Q8TAC9 235 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 KCNV2Q8TDN2 545 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 ZNF419Q96HQ0 510 aaPredicted RBP20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 KCNK16Q96T55 309 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 B3GNT5Q9BYG0 378 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 SH3BP1Q9Y3L3 701 aa20.16■□□□□ 0.82
SUPT16H-203ENST00000555752 APC2O95996 2303 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 CST3P01034 146 aaPredicted RBP20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 IDEP14735 1019 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 GAP43P17677 238 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 GRIK2Q13002 908 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 TOGARAM2Q6ZUX3 1019 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 FBXO32Q969P5 355 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 OTUB2Q96DC9 234 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 LRIG1Q96JA1 1093 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 IL21RQ9HBE5 538 aa20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 DNAJC17Q9NVM6 304 aaKnown RBP20.15■□□□□ 0.82
SUPT16H-203ENST00000555752 WASH3PC4AMC7 463 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 PRRT4C9JH25 899 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 CBFA2T3O75081 653 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 NDUFS2O75306 463 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 ZNF217O75362 1048 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 PGFP49763 221 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 DUOXA2Q1HG44 320 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 HECTD3Q5T447 861 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 NUP93Q8N1F7 819 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 GLIS3Q8NEA6 775 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 MRGPRX1Q96LB2 322 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 ELOVL4Q9GZR5 314 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 OLFML3Q9NRN5 406 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 STK17AQ9UEE5 414 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 STARD13Q9Y3M8 1113 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 ACACAQ13085 2346 aa20.14■□□□□ 0.81
SUPT16H-203ENST00000555752 BPTFQ12830 3046 aa20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 GRAMD4Q6IC98 578 aa20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 KIAA1324Q6UXG2 1013 aaKnown RBP20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 TRAPPC11Q7Z392 1133 aa20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 FAM124BQ9H5Z6 455 aaPredicted RBP20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 CACNA2D2Q9NY47 1150 aa20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 GMIPQ9P107 970 aa20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 PCOLCE2Q9UKZ9 415 aa20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 APOBEC2Q9Y235 224 aaKnown RBP20.13■□□□□ 0.81
SUPT16H-203ENST00000555752 ZNF233A6NK53 670 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 NEDD8-MDP1E9PL57 170 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 SV2BQ7L1I2 683 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 B3GALNT2Q8NCR0 500 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 PDZD8Q8NEN9 1154 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 SETD7Q8WTS6 366 aaKnown RBP20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 HPS3Q969F9 1004 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 CRELD1Q96HD1 420 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 GABRG3Q99928 467 aa20.12■□□□□ 0.81
SUPT16H-203ENST00000555752 A8MXQ7 604 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 ZBTB24O43167 697 aaPredicted RBP20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 GREM1O60565 184 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 EIF5BO60841 1220 aaKnown RBP20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 TACC1O75410 805 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 BMP15O95972 392 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 GNSP15586 552 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 PREPLQ4J6C6 727 aaPredicted RBP20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 SYCP2LQ5T4T6 812 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 RRAGBQ5VZM2 374 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 SDE2Q6IQ49 451 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 TPGS1Q6ZTW0 290 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 NUDT18Q6ZVK8 323 aa20.11■□□□□ 0.81
SUPT16H-203ENST00000555752 GLRX5Q86SX6 157 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms